MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP104643 Location: 1340328..1340504 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Accession: NZ_CP104643 Location: 1340328..1340504 Organism: Salmonella enterica strain 1020677 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5930_RS06375 (1336866) | 1336866..1337264 | + | 399 | Protein_1228 | cytoplasmic protein | - |
| N5930_RS06380 (1337850) | 1337850..1338518 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| N5930_RS06385 (1338545) | 1338545..1339039 | + | 495 | WP_000424949.1 | hypothetical protein | - |
| N5930_RS06390 (1339284) | 1339284..1339940 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| N5930_RS06395 (1340299) | 1340299..1340504 | + | 206 | Protein_1232 | IS5 family transposase ISEcl3 | Transposase |
| N5930_RS06400 (1340577) | 1340577..1341104 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| N5930_RS06405 (1341101) | 1341101..1341391 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| N5930_RS06410 (1341661) | 1341661..1341850 | - | 190 | Protein_1235 | IS3 family transposase | - |
| N5930_RS06415 (1342254) | 1342254..1342697 | - | 444 | WP_000715096.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| N5930_RS06420 (1343153) | 1343153..1343803 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| N5930_RS06425 (1343800) | 1343800..1345488 | + | 1689 | WP_000848113.1 | type III secretion system outer membrane ring protein InvG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0.007 |