MGE detailed information
MGE type: Prophage MGE length: 8694 bp
Accession: NZ_CP104638 Location: 3956061..3964754 Organism: Salmonella enterica strain PNUSAS118466 Replicon: chromosome
Accession: NZ_CP104638 Location: 3956061..3964754 Organism: Salmonella enterica strain PNUSAS118466 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4311_RS20265 (3951865) | 3951865..3952968 | + | 1104 | WP_001528146.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| N4311_RS20270 (3953052) | 3953052..3953186 | - | 135 | WP_012219321.1 | hypothetical protein | - |
| N4311_RS20275 (3953164) | 3953164..3953547 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| N4311_RS20280 (3953969) | 3953969..3955078 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| N4311_RS20285 (3955138) | 3955138..3956064 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| N4311_RS20290 (3956061) | 3956061..3957338 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| N4311_RS20295 (3957335) | 3957335..3958102 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N4311_RS20300 (3958104) | 3958104..3958817 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| N4311_RS20305 (3958949) | 3958949..3959170 | + | 222 | WP_001535398.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N4311_RS20310 (3959167) | 3959167..3959535 | + | 369 | WP_000174966.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N4311_RS20315 (3959794) | 3959794..3961110 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| N4311_RS20320 (3961215) | 3961215..3962102 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| N4311_RS20325 (3962099) | 3962099..3962944 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| N4311_RS20330 (3962947) | 3962947..3964017 | + | 1071 | WP_000907845.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N4311_RS20335 (3964014) | 3964014..3964754 | + | 741 | WP_000073547.1 | glycerophosphodiester phosphodiesterase | - |
| N4311_RS20340 (3964767) | 3964767..3965183 | - | 417 | WP_000826046.1 | DUF2756 family protein | - |
| N4311_RS20345 (3965309) | 3965309..3967051 | + | 1743 | WP_000805094.1 | gamma-glutamyltransferase | - |
| N4311_RS20350 (3967096) | 3967096..3968130 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| N4311_RS20355 (3968127) | 3968127..3969098 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.008 |