MGE detailed information
MGE type: Conjugative plasmid MGE length: 146375 bp
Accession: NZ_CP104517 Location: 1..146375 Organism: Escherichia coli strain E4 Replicon: plasmid p1
Accession: NZ_CP104517 Location: 1..146375 Organism: Escherichia coli strain E4 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O79_RS24275 (N5O79_24275) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| N5O79_RS24280 (N5O79_24280) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| N5O79_RS24285 (N5O79_24285) | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| N5O79_RS24290 (N5O79_24290) | 2687..3589 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| N5O79_RS24295 (N5O79_24295) | 3658..4767 | - | 1110 | WP_000771476.1 | SDR family oxidoreductase | - |
| N5O79_RS24300 (N5O79_24300) | 5200..6153 | - | 954 | WP_000280979.1 | Protease 7 | VF |
| N5O79_RS24305 (N5O79_24305) | 6257..6646 | + | 390 | WP_032072862.1 | IS110 family transposase ISEc20 | Transposase |
| N5O79_RS24310 (N5O79_24310) | 7406..7806 | - | 401 | Protein_7 | integrase core domain-containing protein | - |
| N5O79_RS24315 (N5O79_24315) | 7816..8141 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| N5O79_RS24320 (N5O79_24320) | 8187..8527 | + | 341 | Protein_9 | IS3 family transposase | - |
| N5O79_RS24325 (N5O79_24325) | 9122..10309 | + | 1188 | WP_000928805.1 | efflux RND transporter periplasmic adaptor subunit | - |
| N5O79_RS24330 (N5O79_24330) | 10306..12246 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| N5O79_RS24335 (N5O79_24335) | 12250..13620 | + | 1371 | WP_001318212.1 | efflux transporter outer membrane subunit | - |
| N5O79_RS24340 (N5O79_24340) | 13991..15319 | - | 1329 | WP_000547316.1 | IS4 family transposase IS4 | Transposase |
| N5O79_RS24350 (N5O79_24350) | 16308..16502 | + | 195 | Protein_15 | IS200/IS605-like element IS200C family transposase | - |
| N5O79_RS24355 (N5O79_24355) | 16631..17572 | - | 942 | WP_000974761.1 | hypothetical protein | - |
| N5O79_RS24360 (N5O79_24360) | 17807..19196 | - | 1390 | Protein_17 | ISNCY family transposase ISKpn21 | Transposase |
| N5O79_RS24365 (N5O79_24365) | 19508..19657 | - | 150 | Protein_18 | IS3 family transposase IS2 | Transposase |
| N5O79_RS24370 (N5O79_24370) | 19835..21028 | - | 1194 | WP_261307174.1 | GTP-binding protein | - |
| N5O79_RS24380 (N5O79_24380) | 23418..23711 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| N5O79_RS24385 (N5O79_24385) | 23769..23968 | - | 200 | Protein_22 | lysis protein | - |
| N5O79_RS24390 (N5O79_24390) | 24522..25546 | + | 1025 | Protein_23 | integrase core domain-containing protein | - |
| N5O79_RS24395 (N5O79_24395) | 26857..27972 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| N5O79_RS24400 (N5O79_24400) | 28112..31771 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| N5O79_RS24405 (N5O79_24405) | 31875..33104 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| N5O79_RS24410 (N5O79_24410) | 33189..34145 | + | 957 | WP_000271277.1 | hypothetical protein | VF |
| N5O79_RS24415 (N5O79_24415) | 34190..36367 | - | 2178 | WP_021534948.1 | Ferric enterobactin receptor | VF |
| N5O79_RS24425 (N5O79_24425) | 37989..39023 | - | 1035 | WP_261307175.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| N5O79_RS24430 (N5O79_24430) | 39204..39505 | + | 302 | Protein_31 | hypothetical protein | - |
| N5O79_RS24435 (N5O79_24435) | 39583..39876 | - | 294 | WP_000269327.1 | DUF6404 family protein | - |
| N5O79_RS24440 (N5O79_24440) | 40044..40169 | - | 126 | Protein_33 | type II toxin-antitoxin system toxin YacB | - |
| N5O79_RS24445 (N5O79_24445) | 40169..40437 | - | 269 | Protein_34 | type II toxin-antitoxin system antitoxin YacA | - |
| N5O79_RS24450 (N5O79_24450) | 41048..42322 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| N5O79_RS24455 (N5O79_24455) | 42315..44411 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| N5O79_RS24460 (N5O79_24460) | 44581..44892 | - | 312 | WP_001259758.1 | colicin V | - |
| N5O79_RS24465 (N5O79_24465) | 44870..45106 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| N5O79_RS24470 (N5O79_24470) | 45225..45551 | + | 327 | WP_224485614.1 | hypothetical protein | - |
| N5O79_RS24475 (N5O79_24475) | 45578..47149 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N5O79_RS24480 (N5O79_24480) | 47169..47516 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N5O79_RS24485 (N5O79_24485) | 47516..48193 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| N5O79_RS24490 (N5O79_24490) | 48347..48751 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| N5O79_RS24495 (N5O79_24495) | 48753..49022 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| N5O79_RS24500 (N5O79_24500) | 49019..49999 | + | 981 | WP_001017347.1 | NAD(P)-binding domain-containing protein | - |
| N5O79_RS24505 (N5O79_24505) | 50075..50455 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| N5O79_RS24510 (N5O79_24510) | 50452..50799 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| N5O79_RS24515 (N5O79_24515) | 50849..52386 | + | 1538 | Protein_48 | IS66 family transposase ISEc8 | Transposase |
| N5O79_RS24520 (N5O79_24520) | 52426..52692 | + | 267 | Protein_49 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N5O79_RS24525 (N5O79_24525) | 52739..53130 | - | 392 | Protein_50 | peptide deformylase | - |
| N5O79_RS24530 (N5O79_24530) | 53239..57372 | - | 4134 | WP_089638440.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| N5O79_RS24535 (N5O79_24535) | 57543..57734 | + | 192 | Protein_52 | IS91 family transposase | - |
| N5O79_RS24540 (N5O79_24540) | 58013..58270 | + | 258 | Protein_53 | IS3 family transposase IS911 | Transposase |
| N5O79_RS24545 (N5O79_24545) | 58338..59489 | + | 1152 | WP_021514811.1 | IS30 family transposase IS30D | Transposase |
| N5O79_RS24550 (N5O79_24550) | 59611..59976 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| N5O79_RS24555 (N5O79_24555) | 59976..61091 | + | 1116 | Protein_56 | IS91 family transposase IS91 | Transposase |
| N5O79_RS24560 (N5O79_24560) | 62300..62997 | + | 698 | WP_239978431.1 | IS1 family transposase IS1S | Transposase |
| N5O79_RS24565 (N5O79_24565) | 63009..63293 | - | 285 | Protein_58 | fertility inhibition protein FinO | - |
| N5O79_RS24570 (N5O79_24570) | 63396..64256 | - | 861 | WP_000704512.1 | Quorum-quenching protein AidA | VF |
| N5O79_RS24575 (N5O79_24575) | 64315..65061 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| N5O79_RS24580 (N5O79_24580) | 65081..70351 | - | 5271 | WP_000986967.1 | Multifunctional conjugation protein TraI | Relaxase |
| N5O79_RS24585 (N5O79_24585) | 70433..70660 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| N5O79_RS24590 (N5O79_24590) | 70660..71058 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5O79_RS24595 (N5O79_24595) | 71067..73220 | - | 2154 | WP_053879280.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5O79_RS24600 (N5O79_24600) | 73472..74203 | - | 732 | WP_000850423.1 | conjugal transfer complement resistance protein TraT | - |
| N5O79_RS24605 (N5O79_24605) | 74217..74726 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| N5O79_RS24610 (N5O79_24610) | 74723..77548 | - | 2826 | WP_053879281.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N5O79_RS24615 (N5O79_24615) | 77545..78918 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| N5O79_RS24620 (N5O79_24620) | 78905..79297 | - | 393 | Protein_69 | F-type conjugal transfer protein TrbF | - |
| N5O79_RS24625 (N5O79_24625) | 79284..79625 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| N5O79_RS24630 (N5O79_24630) | 79555..80100 | - | 546 | WP_053879282.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N5O79_RS24635 (N5O79_24635) | 80087..80371 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N5O79_RS24640 (N5O79_24640) | 80452..80727 | + | 276 | WP_072164155.1 | toxin ArtA | - |
| N5O79_RS24645 (N5O79_24645) | 80729..81076 | - | 348 | WP_001287908.1 | conjugal transfer protein TrbA | - |
| N5O79_RS24650 (N5O79_24650) | 81092..81835 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N5O79_RS24655 (N5O79_24655) | 81828..82085 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| N5O79_RS24660 (N5O79_24660) | 82112..83920 | - | 1809 | WP_087904690.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N5O79_RS24665 (N5O79_24665) | 83917..84555 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N5O79_RS24670 (N5O79_24670) | 84564..85556 | - | 993 | WP_087904691.1 | conjugal transfer pilus assembly protein TraU | - |
| N5O79_RS24675 (N5O79_24675) | 85553..86185 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| N5O79_RS24680 (N5O79_24680) | 86182..86568 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| N5O79_RS24685 (N5O79_24685) | 86565..89192 | - | 2628 | WP_087904692.1 | type IV secretion system protein TraC | - |
| N5O79_RS24690 (N5O79_24690) | 89352..89573 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| N5O79_RS24695 (N5O79_24695) | 89708..90223 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N5O79_RS24700 (N5O79_24700) | 90220..90471 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| N5O79_RS24705 (N5O79_24705) | 90483..90680 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| N5O79_RS24710 (N5O79_24710) | 90667..91257 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| N5O79_RS24715 (N5O79_24715) | 91247..92674 | - | 1428 | WP_053879286.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N5O79_RS24720 (N5O79_24720) | 92674..93402 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| N5O79_RS24725 (N5O79_24725) | 93389..93955 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| N5O79_RS24730 (N5O79_24730) | 93977..94288 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| N5O79_RS24735 (N5O79_24735) | 94303..94668 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| N5O79_RS24740 (N5O79_24740) | 94702..94929 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| N5O79_RS24745 (N5O79_24745) | 95025..95351 | - | 327 | Protein_94 | conjugal transfer protein TraJ | - |
| N5O79_RS24755 (N5O79_24755) | 96112..96468 | - | 357 | Protein_96 | PAS domain-containing protein | - |
| N5O79_RS24760 (N5O79_24760) | 96658..97041 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N5O79_RS24765 (N5O79_24765) | 97376..97966 | + | 591 | WP_169284830.1 | hypothetical protein | VF |
| N5O79_RS24770 (N5O79_24770) | 98262..99083 | - | 822 | WP_001234490.1 | DUF932 domain-containing protein | - |
| N5O79_RS24775 (N5O79_24775) | 99202..99489 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| N5O79_RS24780 (N5O79_24780) | 99514..99720 | - | 207 | WP_000547940.1 | hypothetical protein | - |
| N5O79_RS24785 (N5O79_24785) | 99790..100317 | + | 528 | WP_033806434.1 | hypothetical protein | - |
| N5O79_RS24790 (N5O79_24790) | 100287..100478 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| N5O79_RS24795 (N5O79_24795) | 100475..100897 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| N5O79_RS24800 (N5O79_24800) | 100944..101369 | - | 426 | WP_001198918.1 | antirestriction protein | - |
| N5O79_RS24805 (N5O79_24805) | 101782..102558 | - | 777 | WP_001005035.1 | hypothetical protein | - |
| N5O79_RS24810 (N5O79_24810) | 102604..103158 | - | 555 | WP_261307169.1 | DUF1380 domain-containing protein | - |
| N5O79_RS24815 (N5O79_24815) | 103052..103273 | - | 222 | WP_001104870.1 | hypothetical protein | - |
| N5O79_RS24820 (N5O79_24820) | 103274..103957 | - | 684 | WP_261307170.1 | DNA methylase | - |
| N5O79_RS24825 (N5O79_24825) | 104034..104339 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| N5O79_RS24830 (N5O79_24830) | 104343..105244 | - | 902 | Protein_111 | DUF1281 domain-containing protein | - |
| N5O79_RS24835 (N5O79_24835) | 106111..107082 | - | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N5O79_RS24840 (N5O79_24840) | 107082..108248 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| N5O79_RS24845 (N5O79_24845) | 108836..109591 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| N5O79_RS24850 (N5O79_24850) | 110379..111185 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| N5O79_RS24855 (N5O79_24855) | 111186..111491 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N5O79_RS24860 (N5O79_24860) | 111493..111711 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N5O79_RS24865 (N5O79_24865) | 112303..112791 | + | 489 | WP_011254646.1 | hypothetical protein | - |
| N5O79_RS24870 (N5O79_24870) | 112825..113850 | - | 1026 | Protein_119 | hypothetical protein | - |
| N5O79_RS24875 (N5O79_24875) | 113882..115453 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N5O79_RS24880 (N5O79_24880) | 115473..115820 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N5O79_RS24885 (N5O79_24885) | 115820..116497 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| N5O79_RS24890 (N5O79_24890) | 116832..117605 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| N5O79_RS24895 (N5O79_24895) | 117618..118118 | - | 501 | WP_261307171.1 | HEPN family nuclease | - |
| N5O79_RS24900 (N5O79_24900) | 118383..118613 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5O79_RS24905 (N5O79_24905) | 118610..119026 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5O79_RS24910 (N5O79_24910) | 119071..121863 | - | 2793 | WP_032492269.1 | hypothetical protein | - |
| N5O79_RS24915 (N5O79_24915) | 122125..122822 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| N5O79_RS24920 (N5O79_24920) | 122833..123642 | - | 810 | WP_261307172.1 | hypothetical protein | - |
| N5O79_RS24925 (N5O79_24925) | 124023..124253 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5O79_RS24930 (N5O79_24930) | 124250..124666 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5O79_RS24935 (N5O79_24935) | 124741..126306 | + | 1566 | WP_261307173.1 | AAA family ATPase | - |
| N5O79_RS24940 (N5O79_24940) | 126291..127313 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| N5O79_RS24950 (N5O79_24950) | 128644..130845 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| N5O79_RS24955 (N5O79_24955) | 130871..132204 | - | 1334 | Protein_136 | L-lysine N6-monooxygenase | VF |
| N5O79_RS24960 (N5O79_24960) | 132201..133943 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| N5O79_RS24965 (N5O79_24965) | 133943..134891 | - | 949 | Protein_138 | N(6)-hydroxylysine O-acetyltransferase | VF |
| N5O79_RS24970 (N5O79_24970) | 134892..136616 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| N5O79_RS24975 (N5O79_24975) | 136752..137945 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| N5O79_RS24980 (N5O79_24980) | 138325..138705 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| N5O79_RS24985 (N5O79_24985) | 139046..139459 | - | 414 | Protein_142 | phosphopyruvate hydratase | - |
| N5O79_RS24990 (N5O79_24990) | 139457..139714 | + | 258 | Protein_143 | transposase | - |
| N5O79_RS24995 (N5O79_24995) | 139947..140804 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| N5O79_RS25000 (N5O79_25000) | 140801..141658 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| N5O79_RS25005 (N5O79_25005) | 141655..142482 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| N5O79_RS25010 (N5O79_25010) | 142482..143396 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| N5O79_RS25015 (N5O79_25015) | 143752..144449 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| N5O79_RS25020 (N5O79_25020) | 144629..145140 | - | 512 | Protein_149 | DUF4113 domain-containing protein | - |
| N5O79_RS25025 (N5O79_25025) | 145201..145305 | - | 105 | Protein_150 | AAA family ATPase | - |
| N5O79_RS25030 (N5O79_25030) | 145307..145630 | - | 324 | Protein_151 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|