MGE detailed information
MGE type: Prophage MGE length: 38318 bp
Accession: NZ_CP104484 Location: 2095004..2133321 Organism: Salmonella enterica strain SalSpp_sample_07_No.3 Replicon: chromosome
Accession: NZ_CP104484 Location: 2095004..2133321 Organism: Salmonella enterica strain SalSpp_sample_07_No.3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4231_RS10220 () | 2091277..2091918 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N4231_RS10225 () | 2092018..2093196 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N4231_RS10230 () | 2093327..2093617 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N4231_RS10235 () | 2093685..2094038 | + | 354 | WP_001042119.1 | protein YebF | - |
| N4231_RS10240 () | 2094132..2094791 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| N4231_RS10245 () | 2095004..2097055 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| N4231_RS10250 () | 2097090..2097788 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| N4231_RS10255 () | 2097812..2098468 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| N4231_RS10260 () | 2098576..2098806 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N4231_RS10265 () | 2098944..2099318 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| N4231_RS10270 () | 2099319..2100194 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| N4231_RS10275 () | 2100211..2100564 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2100664..2100809 | - | 146 | - | - | Antitoxin Detail |
| - | 2100704..2100807 | + | 104 | - | - | Toxin Detail |
| N4231_RS10280 () | 2100938..2101861 | - | 924 | Protein_2011 | hypothetical protein ; Integrase | Integrase |
| N4231_RS10285 () | 2102125..2102586 | - | 462 | Protein_2012 | DNA breaking-rejoining protein | - |
| N4231_RS10290 () | 2102575..2102766 | + | 192 | Protein_2013 | glycoside hydrolase family 19 protein | - |
| N4231_RS10295 () | 2102820..2103353 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| N4231_RS10300 () | 2103610..2103777 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| N4231_RS10305 () | 2103842..2104030 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| N4231_RS10310 () | 2104085..2104345 | + | 261 | Protein_2017 | DUF1441 family protein | - |
| N4231_RS10315 () | 2104560..2104904 | + | 345 | Protein_2018 | macro domain-containing protein | - |
| N4231_RS10320 () | 2104914..2105384 | + | 471 | Protein_2019 | tail fiber assembly protein | - |
| N4231_RS10325 () | 2105481..2105681 | - | 201 | WP_014344379.1 | PagK family vesicle-borne virulence factor | - |
| N4231_RS10330 () | 2106071..2106251 | - | 181 | Protein_2021 | IS3 family transposase | - |
| N4231_RS10335 () | 2106242..2106343 | + | 102 | Protein_2022 | arsenic transporter | - |
| N4231_RS10340 () | 2106965..2107197 | + | 233 | Protein_2023 | helix-turn-helix domain-containing protein | - |
| N4231_RS10345 () | 2107524..2108138 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| N4231_RS10350 () | 2108148..2108306 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N4231_RS10355 () | 2108439..2109353 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| N4231_RS10360 () | 2110666..2111088 | - | 423 | Protein_2027 | hypothetical protein ; Integrase | Integrase |
| N4231_RS10365 () | 2111158..2112352 | + | 1195 | Protein_2028 | IS256 family transposase IS285 | Transposase |
| N4231_RS10370 () | 2112498..2112638 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| N4231_RS10375 () | 2112804..2113073 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| N4231_RS10380 () | 2113443..2113862 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| N4231_RS10385 () | 2114250..2114726 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| N4231_RS10390 () | 2115056..2115451 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| N4231_RS10395 () | 2116134..2116856 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| N4231_RS10400 () | 2117141..2117305 | + | 165 | WP_001134856.1 | membrane protein | - |
| N4231_RS10405 () | 2117529..2118179 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| N4231_RS10410 () | 2118198..2118389 | - | 192 | WP_000457836.1 | YebW family protein | - |
| N4231_RS10415 () | 2118500..2118736 | - | 237 | WP_024131108.1 | YebV family protein | - |
| N4231_RS10420 () | 2118854..2120293 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N4231_RS10425 () | 2120371..2123004 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| N4231_RS10430 () | 2122973..2124256 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| N4231_RS10435 () | 2124385..2124882 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| N4231_RS10440 () | 2124980..2125666 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| N4231_RS10445 () | 2125686..2127734 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| N4231_RS10450 () | 2127928..2128809 | + | 882 | WP_000984498.1 | protease HtpX | - |
| N4231_RS10455 () | 2128857..2130230 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| N4231_RS10460 () | 2130406..2131197 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| N4231_RS10465 () | 2131409..2131648 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| N4231_RS10470 () | 2131806..2131949 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| N4231_RS10475 () | 2132020..2132307 | + | 288 | WP_001000660.1 | YebO family protein | - |
| N4231_RS10480 () | 2132956..2133099 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| N4231_RS10485 () | 2133112..2133321 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N4231_RS10490 () | 2133541..2135286 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| N4231_RS10495 () | 2135352..2136161 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N4231_RS10500 () | 2136158..2136724 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| N4231_RS10505 () | 2137134..2137592 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |