MGE detailed information
MGE type: Prophage MGE length: 8695 bp
Accession: NZ_CP104482 Location: 319014..327708 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Accession: NZ_CP104482 Location: 319014..327708 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4230_RS01420 (314818) | 314818..315921 | + | 1104 | WP_001535347.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| N4230_RS01425 (316005) | 316005..316139 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| N4230_RS01430 (316117) | 316117..316500 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| N4230_RS01435 (316922) | 316922..318031 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| N4230_RS01440 (318091) | 318091..319017 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| N4230_RS01445 (319014) | 319014..320291 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| N4230_RS01450 (320288) | 320288..321055 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| N4230_RS01455 (321057) | 321057..321770 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| N4230_RS01460 (321902) | 321902..322123 | + | 222 | WP_001535398.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N4230_RS01465 (322120) | 322120..322488 | + | 369 | WP_000174966.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N4230_RS01470 (322748) | 322748..324064 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| N4230_RS01475 (324169) | 324169..325056 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| N4230_RS01480 (325053) | 325053..325898 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| N4230_RS01485 (325901) | 325901..326971 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| N4230_RS01490 (326968) | 326968..327708 | + | 741 | WP_000073542.1 | glycerophosphodiester phosphodiesterase | - |
| N4230_RS01495 (327721) | 327721..328137 | - | 417 | WP_000826042.1 | DUF2756 family protein | - |
| N4230_RS01500 (328263) | 328263..330005 | + | 1743 | WP_080192316.1 | gamma-glutamyltransferase | - |
| N4230_RS01505 (330050) | 330050..331084 | - | 1035 | WP_080193346.1 | phosphotriesterase | - |
| N4230_RS01510 (331081) | 331081..332052 | - | 972 | WP_001038954.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.008 |