MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP104479 Location: 1034200..1034376 Organism: Salmonella enterica strain SalSpp_sample_09_No.5 Replicon: chromosome
Accession: NZ_CP104479 Location: 1034200..1034376 Organism: Salmonella enterica strain SalSpp_sample_09_No.5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4G50_RS04925 (1030737) | 1030737..1031158 | + | 422 | Protein_966 | cytoplasmic protein | - |
| N4G50_RS04930 (1031326) | 1031326..1031565 | + | 240 | Protein_967 | hypothetical protein | - |
| N4G50_RS04935 (1031722) | 1031722..1032390 | + | 669 | WP_024156635.1 | hypothetical protein | - |
| N4G50_RS04940 (1032417) | 1032417..1032911 | + | 495 | WP_000424942.1 | hypothetical protein | - |
| N4G50_RS04945 (1033156) | 1033156..1033812 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| N4G50_RS04950 (1034171) | 1034171..1034376 | + | 206 | Protein_971 | IS5 family transposase ISEcl3 | Transposase |
| N4G50_RS04955 (1034449) | 1034449..1034976 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| N4G50_RS04960 (1034973) | 1034973..1035263 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| N4G50_RS04965 (1035533) | 1035533..1035733 | - | 201 | Protein_974 | IS3 family transposase | - |
| N4G50_RS04970 (1035974) | 1035974..1036300 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| N4G50_RS04975 (1036573) | 1036573..1036920 | - | 348 | WP_001555786.1 | DUF1493 family protein | - |
| N4G50_RS04980 (1036905) | 1036905..1037354 | - | 450 | WP_024156634.1 | hypothetical protein | - |
| N4G50_RS04985 (1037786) | 1037786..1038229 | - | 444 | WP_000715100.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| N4G50_RS04990 (1038685) | 1038685..1039335 | + | 651 | WP_001728903.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |