MGE detailed information
MGE type: Mobilizable plasmid MGE length: 123517 bp
Accession: NZ_CP104329 Location: 1..123517 Organism: Escherichia coli strain THB42-F2 Replicon: plasmid pHB42-F2
Accession: NZ_CP104329 Location: 1..123517 Organism: Escherichia coli strain THB42-F2 Replicon: plasmid pHB42-F2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0499_RS22350 (N0499_22350) | 488..1516 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| N0499_RS22355 (N0499_22355) | 2217..2407 | + | 191 | Protein_1 | hypothetical protein | - |
| N0499_RS22360 (N0499_22360) | 2473..3177 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| N0499_RS22365 (N0499_22365) | 3230..3985 | + | 756 | Protein_3 | IS110 family transposase IS5075 | Transposase |
| N0499_RS22370 (N0499_22370) | 4257..4343 | - | 87 | Protein_4 | Arm DNA-binding domain-containing protein | - |
| N0499_RS22375 (N0499_22375) | 4673..5488 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| N0499_RS22380 (N0499_22380) | 5549..6352 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N0499_RS22385 (N0499_22385) | 6352..7188 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| N0499_RS22390 (N0499_22390) | 7494..7736 | + | 243 | WP_000844627.1 | transposase | - |
| N0499_RS22395 (N0499_22395) | 7768..8418 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N0499_RS22400 (N0499_22400) | 8524..9723 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| N0499_RS22405 (N0499_22405) | 9690..9878 | - | 189 | Protein_11 | IS91 family transposase | - |
| N0499_RS22410 (N0499_22410) | 9990..10295 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N0499_RS22415 (N0499_22415) | 10323..11537 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| N0499_RS22420 (N0499_22420) | 11754..12638 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| N0499_RS22425 (N0499_22425) | 12669..14162 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| N0499_RS22430 (N0499_22430) | 14373..14597 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| N0499_RS22435 (N0499_22435) | 14594..15331 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N0499_RS22440 (N0499_22440) | 15743..16447 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| N0499_RS22445 (N0499_22445) | 16512..16721 | + | 210 | Protein_19 | IS1 family transposase | - |
| N0499_RS22450 (N0499_22450) | 18019..18198 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| N0499_RS22455 (N0499_22455) | 18314..18958 | - | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N0499_RS22460 (N0499_22460) | 19253..19873 | + | 621 | WP_000864788.1 | ParA family protein | - |
| N0499_RS22465 (N0499_22465) | 19925..20155 | + | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| N0499_RS22470 (N0499_22470) | 20579..21643 | + | 1065 | WP_012291478.1 | ParA family protein | - |
| N0499_RS22475 (N0499_22475) | 22181..22534 | - | 354 | WP_024129958.1 | DNA distortion polypeptide 3 | - |
| N0499_RS22480 (N0499_22480) | 22671..23117 | - | 447 | WP_001074384.1 | hypothetical protein | - |
| N0499_RS22485 (N0499_22485) | 23121..23963 | - | 843 | WP_000435064.1 | replication initiation protein | - |
| N0499_RS22490 (N0499_22490) | 23984..24823 | - | 840 | WP_024129959.1 | replication initiation protein | - |
| N0499_RS22495 (N0499_22495) | 26058..26309 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| N0499_RS22500 (N0499_22500) | 26299..26580 | + | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0499_RS22505 (N0499_22505) | 26819..26911 | - | 93 | Protein_31 | IS6 family transposase | - |
| N0499_RS22510 (N0499_22510) | 27077..28276 | - | 1200 | WP_000948429.1 | IS91 family transposase IS1294 | Transposase |
| N0499_RS22515 (N0499_22515) | 28286..28474 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| N0499_RS22520 (N0499_22520) | 28594..30024 | + | 1431 | Protein_34 | IS4 family transposase IS50R | Transposase |
| N0499_RS22525 (N0499_22525) | 30053..30847 | + | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N0499_RS22530 (N0499_22530) | 30868..31104 | + | 237 | Protein_36 | hypothetical protein | - |
| N0499_RS22535 (N0499_22535) | 31154..31858 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0499_RS22540 (N0499_22540) | 31804..32310 | - | 507 | WP_250697724.1 | replication initiation protein | - |
| N0499_RS22545 (N0499_22545) | 32316..33020 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N0499_RS22550 (N0499_22550) | 33219..33542 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| N0499_RS22555 (N0499_22555) | 33647..34684 | + | 1038 | WP_044502555.1 | permease | - |
| N0499_RS22560 (N0499_22560) | 34977..35594 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| N0499_RS22565 (N0499_22565) | 35786..37342 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| N0499_RS22570 (N0499_22570) | 37605..38195 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| N0499_RS22575 (N0499_22575) | 38195..38452 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| N0499_RS22580 (N0499_22580) | 38806..40944 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| N0499_RS22585 (N0499_22585) | 41106..41522 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N0499_RS22590 (N0499_22590) | 41519..41749 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N0499_RS22595 (N0499_22595) | 42045..42335 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| N0499_RS22600 (N0499_22600) | 42325..43224 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| N0499_RS22605 (N0499_22605) | 43274..45499 | - | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| N0499_RS22610 (N0499_22610) | 45501..46589 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| N0499_RS22615 (N0499_22615) | 47132..47482 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| N0499_RS22620 (N0499_22620) | 47533..48276 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| N0499_RS22625 (N0499_22625) | 48273..49049 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| N0499_RS22630 (N0499_22630) | 49107..49364 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| N0499_RS22635 (N0499_22635) | 49493..49597 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| N0499_RS22640 (N0499_22640) | 50127..50993 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| N0499_RS22645 (N0499_22645) | 51170..51439 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| N0499_RS22650 (N0499_22650) | 51854..53059 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| N0499_RS22655 (N0499_22655) | 53059..54033 | + | 975 | WP_000064119.1 | ParB family protein | - |
| N0499_RS22660 (N0499_22660) | 54115..55386 | - | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| N0499_RS22665 (N0499_22665) | 55386..55817 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N0499_RS22670 (N0499_22670) | 56223..57710 | + | 1488 | Protein_64 | group II intron reverse transcriptase/maturase | - |
| N0499_RS22675 (N0499_22675) | 57862..58559 | + | 698 | WP_223229472.1 | IS1-like element IS1X3 family transposase | - |
| N0499_RS22680 (N0499_22680) | 58569..58877 | + | 309 | Protein_66 | replication initiation protein | - |
| N0499_RS22685 (N0499_22685) | 60280..61248 | + | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| N0499_RS22690 (N0499_22690) | 61388..61774 | - | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| N0499_RS22695 (N0499_22695) | 62356..62589 | + | 234 | Protein_69 | transposase | - |
| N0499_RS22700 (N0499_22700) | 62622..64136 | - | 1515 | Protein_70 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N0499_RS22705 (N0499_22705) | 64202..64906 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0499_RS22710 (N0499_22710) | 65614..65766 | + | 153 | Protein_72 | FlmC family protein | - |
| N0499_RS22715 (N0499_22715) | 65714..65833 | + | 120 | WP_229002406.1 | Hok/Gef family protein | - |
| N0499_RS22720 (N0499_22720) | 65983..66579 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| N0499_RS22725 (N0499_22725) | 66597..66881 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| N0499_RS22730 (N0499_22730) | 66955..67620 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| N0499_RS22735 (N0499_22735) | 68209..68538 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| N0499_RS22740 (N0499_22740) | 68939..69454 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| N0499_RS22745 (N0499_22745) | 69558..70100 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| N0499_RS22750 (N0499_22750) | 70097..70351 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| N0499_RS22755 (N0499_22755) | 70348..70590 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| N0499_RS22760 (N0499_22760) | 71161..71454 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| N0499_RS22765 (N0499_22765) | 71943..72191 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| N0499_RS22770 (N0499_22770) | 72188..72535 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| N0499_RS22775 (N0499_22775) | 72623..73066 | - | 444 | WP_023223351.1 | hypothetical protein | - |
| N0499_RS22780 (N0499_22780) | 73307..73606 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| N0499_RS22785 (N0499_22785) | 73866..74192 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| N0499_RS22790 (N0499_22790) | 74194..74517 | - | 324 | WP_223666488.1 | hypothetical protein | - |
| N0499_RS22795 (N0499_22795) | 74494..74634 | - | 141 | Protein_89 | hypothetical protein | - |
| N0499_RS22800 (N0499_22800) | 74654..75361 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| N0499_RS22805 (N0499_22805) | 75363..76115 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| N0499_RS22810 (N0499_22810) | 76133..76534 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| N0499_RS22815 (N0499_22815) | 76902..77243 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| N0499_RS22820 (N0499_22820) | 77240..81553 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| N0499_RS22825 (N0499_22825) | 81774..83399 | + | 1626 | WP_049589868.1 | phosphoethanolamine--lipid A transferase MCR-1.1 | VF |
| N0499_RS22830 (N0499_22830) | 83471..84244 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| N0499_RS22835 (N0499_22835) | 84203..84643 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| N0499_RS22840 (N0499_22840) | 84989..85195 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| N0499_RS22845 (N0499_22845) | 85264..87429 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| N0499_RS22850 (N0499_22850) | 87434..88009 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| N0499_RS22855 (N0499_22855) | 88179..89855 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| N0499_RS22860 (N0499_22860) | 89950..90482 | - | 533 | Protein_102 | thermonuclease family protein | - |
| N0499_RS22865 (N0499_22865) | 90512..91165 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| N0499_RS22870 (N0499_22870) | 91177..92301 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| N0499_RS22875 (N0499_22875) | 94050..95303 | - | 1254 | WP_010895887.1 | hypothetical protein | VF |
| N0499_RS22880 (N0499_22880) | 95316..95951 | - | 636 | WP_000934977.1 | hypothetical protein | VF |
| N0499_RS22885 (N0499_22885) | 95955..96437 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| N0499_RS22890 (N0499_22890) | 96503..97066 | - | 564 | WP_034169414.1 | type 4 pilus major pilin | - |
| N0499_RS22895 (N0499_22895) | 97116..98225 | - | 1110 | WP_000974903.1 | hypothetical protein | VF |
| N0499_RS22900 (N0499_22900) | 98216..99754 | - | 1539 | WP_000466225.1 | hypothetical protein | VF |
| N0499_RS22905 (N0499_22905) | 99779..100273 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| N0499_RS22910 (N0499_22910) | 100257..101579 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| N0499_RS22915 (N0499_22915) | 101618..103261 | - | 1644 | WP_001035592.1 | Type 3 secretion system secretin | VF |
| N0499_RS22920 (N0499_22920) | 103254..103790 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| N0499_RS22925 (N0499_22925) | 103837..105795 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| N0499_RS22930 (N0499_22930) | 105811..106866 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| N0499_RS22935 (N0499_22935) | 106885..108024 | - | 1140 | WP_034169415.1 | hypothetical protein | VF |
| N0499_RS22940 (N0499_22940) | 108014..108784 | - | 771 | WP_000979242.1 | hypothetical protein | VF |
| N0499_RS22945 (N0499_22945) | 108781..109515 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| N0499_RS22950 (N0499_22950) | 109681..112038 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| N0499_RS22955 (N0499_22955) | 112044..112364 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| N0499_RS22960 (N0499_22960) | 112435..112725 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| N0499_RS22965 (N0499_22965) | 112725..113309 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| N0499_RS22970 (N0499_22970) | 113330..113728 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| N0499_RS22975 (N0499_22975) | 113847..114284 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| N0499_RS22980 (N0499_22980) | 114290..115525 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| N0499_RS22985 (N0499_22985) | 115528..115827 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| N0499_RS22990 (N0499_22990) | 115875..116684 | + | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| N0499_RS22995 (N0499_22995) | 116907..117131 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| N0499_RS23000 (N0499_23000) | 117140..117784 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| N0499_RS23005 (N0499_23005) | 117790..118785 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| N0499_RS23010 (N0499_23010) | 118789..119046 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| N0499_RS23015 (N0499_23015) | 119043..119345 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| N0499_RS23020 (N0499_23020) | 119326..119583 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| N0499_RS23025 (N0499_23025) | 119616..120062 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| N0499_RS23030 (N0499_23030) | 120073..120243 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| N0499_RS23035 (N0499_23035) | 120247..120690 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| N0499_RS23040 (N0499_23040) | 121064..122017 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| N0499_RS23045 (N0499_23045) | 122044..122220 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| N0499_RS23050 (N0499_23050) | 122213..122428 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| N0499_RS23055 (N0499_23055) | 122421..122873 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|