MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP104326 Location: 1097656..1129536 Organism: Escherichia coli strain THB42-F1 Replicon: chromosome
Accession: NZ_CP104326 Location: 1097656..1129536 Organism: Escherichia coli strain THB42-F1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0470_RS05275 (1093840) | 1093840..1095108 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| N0470_RS05280 (1095128) | 1095128..1096105 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| N0470_RS05285 (1096441) | 1096441..1098693 | - | 2253 | Protein_1031 | alpha-amylase family glycosyl hydrolase | - |
| N0470_RS05295 (1100079) | 1100079..1101452 | + | 1374 | Protein_1032 | DUF5507 domain-containing protein | - |
| N0470_RS05300 (1101798) | 1101798..1101956 | + | 159 | Protein_1033 | recombinase family protein | - |
| N0470_RS05305 (1102180) | 1102180..1102299 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| N0470_RS05310 (1102364) | 1102364..1106944 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| N0470_RS05315 (1107308) | 1107308..1107637 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| N0470_RS05320 (1107658) | 1107658..1107975 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N0470_RS05325 (1108013) | 1108013..1108213 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| N0470_RS05330 (1108222) | 1108222..1108704 | - | 483 | WP_001407480.1 | RadC family protein | - |
| N0470_RS05335 (1108713) | 1108713..1109171 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| N0470_RS05340 (1109274) | 1109274..1109497 | - | 224 | Protein_1041 | DUF905 domain-containing protein | - |
| N0470_RS05345 (1110069) | 1110069..1111772 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| N0470_RS05350 (1111914) | 1111914..1112923 | + | 1010 | Protein_1043 | arsenic transporter | - |
| N0470_RS05355 (1112936) | 1112936..1113088 | + | 153 | Protein_1044 | arsenate reductase | - |
| N0470_RS05360 (1113475) | 1113475..1113942 | - | 468 | WP_000702495.1 | protein YfjT | - |
| N0470_RS05365 (1113966) | 1113966..1114409 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| N0470_RS05370 (1114409) | 1114409..1114645 | - | 237 | WP_001144029.1 | protein YpjK | - |
| N0470_RS05375 (1114686) | 1114686..1115387 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| N0470_RS05380 (1115604) | 1115604..1116425 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| N0470_RS05385 (1116517) | 1116517..1117380 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| N0470_RS05390 (1117735) | 1117735..1118106 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| N0470_RS05395 (1118099) | 1118099..1119172 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| N0470_RS05400 (1119314) | 1119314..1119577 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| N0470_RS05405 (1119937) | 1119937..1121553 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| N0470_RS05410 (1121550) | 1121550..1123739 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| N0470_RS05415 (1123917) | 1123917..1124543 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| N0470_RS05420 (1124696) | 1124696..1126105 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| N0470_RS05425 (1126234) | 1126234..1126446 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| N0470_RS05430 (1126490) | 1126490..1127446 | + | 957 | WP_000510827.1 | protein YfjH | - |
| N0470_RS05435 (1127690) | 1127690..1128931 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| N0470_RS05445 (1129712) | 1129712..1130194 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| N0470_RS05450 (1130365) | 1130365..1130802 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| N0470_RS05455 (1130792) | 1130792..1131082 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| N0470_RS05460 (1131144) | 1131144..1131485 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| N0470_RS05465 (1131634) | 1131634..1133295 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| N0470_RS05470 (1133381) | 1133381..1134259 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |