MGE detailed information
MGE type: Genomic_island MGE length: 15961 bp
Accession: NZ_CP104114 Location: 981391..997351 Organism: Escherichia coli strain USDA-ARS-USMARC-51408 Replicon: chromosome
Accession: NZ_CP104114 Location: 981391..997351 Organism: Escherichia coli strain USDA-ARS-USMARC-51408 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1706_RS04550 (980568) | 980568..980960 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| N1706_RS04555 (981391) | 981391..982527 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| N1706_RS04560 (982568) | 982568..983338 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| N1706_RS04565 (983519) | 983519..983965 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| N1706_RS04570 (984008) | 984008..986452 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| N1706_RS04575 (986692) | 986692..987270 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| N1706_RS04580 (987476) | 987476..988243 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| N1706_RS04585 (988214) | 988214..988954 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| N1706_RS04590 (989110) | 989110..989388 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| N1706_RS04595 (989391) | 989391..989651 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| N1706_RS04600 (989861) | 989861..990610 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| N1706_RS04605 (990786) | 990786..991283 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| N1706_RS04610 (991507) | 991507..993219 | - | 1713 | Protein_879 | Flagellar biosynthesis protein FlhA | VF |
| N1706_RS04615 (993191) | 993191..993976 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| N1706_RS04620 (994047) | 994047..995102 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| N1706_RS04625 (995154) | 995154..995447 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| N1706_RS04630 (995450) | 995450..995848 | + | 399 | WP_001263488.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| N1706_RS04635 (995858) | 995858..996310 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| N1706_RS04640 (996628) | 996628..996834 | + | 207 | Protein_885 | RtcB family protein | - |
| N1706_RS04645 (996830) | 996830..997351 | + | 522 | Protein_886 | peptide chain release factor H | - |
| N1706_RS04650 (997408) | 997408..998865 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| N1706_RS04655 (999126) | 999126..999584 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (1000180) | 1000180..1000260 | + | 81 | NuclAT_11 | - | - |
| - (1000180) | 1000180..1000260 | + | 81 | NuclAT_11 | - | - |
| - (1000180) | 1000180..1000260 | + | 81 | NuclAT_11 | - | - |
| - (1000180) | 1000180..1000260 | + | 81 | NuclAT_11 | - | - |
| N1706_RS04660 (999676) | 999676..1000920 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| N1706_RS04665 (1000978) | 1000978..1001379 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.008 |