MGE detailed information
MGE type: Conjugative plasmid MGE length: 154403 bp
Accession: NZ_CP104078 Location: 1..154403 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-1
Accession: NZ_CP104078 Location: 1..154403 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
N0M81_RS22470 (262) | 262..519 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
N0M81_RS22475 (536) | 536..787 | - | 252 | WP_223195197.1 | replication protein RepA | - |
N0M81_RS22480 (778) | 778..825 | + | 48 | WP_229471593.1 | hypothetical protein | - |
N0M81_RS22485 (1292) | 1292..2149 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
N0M81_RS22490 (2849) | 2849..2989 | + | 141 | WP_001333237.1 | hypothetical protein | - |
N0M81_RS22495 (3087) | 3087..3740 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
N0M81_RS22500 (3833) | 3833..4090 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
N0M81_RS22505 (4023) | 4023..4424 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
N0M81_RS22510 (4709) | 4709..6019 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
N0M81_RS22515 (6048) | 6048..6146 | + | 99 | Protein_9 | IS1 family transposase | - |
N0M81_RS22520 (6296) | 6296..7156 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
N0M81_RS22525 (7288) | 7288..7992 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
N0M81_RS22530 (8097) | 8097..8255 | + | 159 | Protein_12 | chromate resistance protein | - |
N0M81_RS22535 (8883) | 8883..10254 | - | 1372 | Protein_13 | IS1182 family transposase ISCfr1 | Transposase |
N0M81_RS22540 (10369) | 10369..11505 | - | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
N0M81_RS22545 (11556) | 11556..11783 | - | 228 | WP_000248278.1 | hypothetical protein | - |
N0M81_RS22550 (11807) | 11807..11998 | + | 192 | WP_000951934.1 | hypothetical protein | - |
N0M81_RS22555 (12480) | 12480..13022 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
N0M81_RS22560 (13035) | 13035..13895 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
N0M81_RS22565 (14038) | 14038..14943 | + | 906 | Protein_19 | IS4 family transposase IS10R | Transposase |
N0M81_RS22570 (14992) | 14992..15696 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
N0M81_RS22575 (15820) | 15820..17070 | + | 1251 | Protein_21 | transposase | - |
N0M81_RS22580 (17135) | 17135..17839 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
N0M81_RS22585 (17961) | 17961..18866 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
N0M81_RS22590 (18863) | 18863..20101 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
N0M81_RS22595 (20101) | 20101..20685 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
N0M81_RS22600 (21178) | 21178..21942 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
N0M81_RS22605 (22060) | 22060..22125 | - | 66 | Protein_27 | EAL domain-containing protein | - |
N0M81_RS22610 (22169) | 22169..22474 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
N0M81_RS22615 (22484) | 22484..22840 | - | 357 | Protein_29 | chromate transporter | - |
N0M81_RS22620 (22897) | 22897..23594 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
N0M81_RS22625 (23848) | 23848..24870 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
N0M81_RS22630 (24855) | 24855..26420 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
N0M81_RS22635 (26495) | 26495..26911 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
N0M81_RS22640 (26908) | 26908..27138 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
N0M81_RS22645 (27519) | 27519..31313 | + | 3795 | WP_259904975.1 | pcar | - |
N0M81_RS22650 (31358) | 31358..31774 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
N0M81_RS22655 (31771) | 31771..32001 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
N0M81_RS22660 (32266) | 32266..32766 | + | 501 | WP_000528931.1 | HEPN family nuclease | - |
N0M81_RS22665 (32779) | 32779..33552 | + | 774 | WP_000905949.1 | hypothetical protein | - |
N0M81_RS22670 (33719) | 33719..34852 | + | 1134 | WP_000545987.1 | DUF3800 domain-containing protein | - |
N0M81_RS22675 (34886) | 34886..35398 | - | 513 | WP_000151784.1 | hypothetical protein | - |
N0M81_RS22680 (35938) | 35938..36288 | + | 351 | WP_000493378.1 | hypothetical protein | - |
N0M81_RS22685 (36339) | 36339..37082 | + | 744 | WP_000129823.1 | hypothetical protein | - |
N0M81_RS22690 (37079) | 37079..37855 | + | 777 | WP_000015958.1 | site-specific integrase | - |
N0M81_RS22695 (37913) | 37913..38170 | - | 258 | WP_000764642.1 | hypothetical protein | - |
N0M81_RS22700 (38299) | 38299..38403 | - | 105 | WP_032409716.1 | hypothetical protein | - |
N0M81_RS22705 (38633) | 38633..38821 | + | 189 | WP_000957857.1 | hypothetical protein | - |
N0M81_RS22710 (38831) | 38831..40030 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
N0M81_RS22715 (40203) | 40203..40565 | + | 363 | Protein_49 | FidL-like protein | - |
N0M81_RS22720 (40570) | 40570..40986 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
N0M81_RS22725 (41246) | 41246..41563 | - | 318 | Protein_51 | IS5/IS1182 family transposase | - |
N0M81_RS22730 (41598) | 41598..42473 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
N0M81_RS22735 (42776) | 42776..43480 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
N0M81_RS22740 (43546) | 43546..45060 | + | 1515 | Protein_54 | Tn3 family transposase TnpA_TnAs1 | Transposase |
N0M81_RS22745 (45170) | 45170..45448 | + | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
N0M81_RS22750 (45494) | 45494..46342 | + | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
N0M81_RS22755 (46459) | 46459..46941 | + | 483 | WP_001311056.1 | hypothetical protein | - |
N0M81_RS22760 (47243) | 47243..47590 | + | 348 | WP_000142450.1 | DUF6404 family protein | - |
N0M81_RS22765 (47608) | 47608..47793 | - | 186 | Protein_59 | hypothetical protein | - |
N0M81_RS22770 (48019) | 48019..51834 | + | 3816 | WP_223364258.1 | hypothetical protein | - |
N0M81_RS22775 (52366) | 52366..52716 | + | 351 | WP_000493379.1 | hypothetical protein | - |
N0M81_RS22780 (52760) | 52760..53449 | + | 690 | WP_000796228.1 | hypothetical protein | - |
N0M81_RS22785 (53446) | 53446..54237 | + | 792 | WP_000016493.1 | site-specific integrase | - |
N0M81_RS22790 (54415) | 54415..54768 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
N0M81_RS22795 (54818) | 54818..55633 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
N0M81_RS22800 (55877) | 55877..56404 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
N0M81_RS22805 (56422) | 56422..56589 | - | 168 | Protein_67 | colicin-B | - |
N0M81_RS22810 (56762) | 56762..56965 | + | 204 | Protein_68 | hypothetical protein | - |
N0M81_RS22815 (57507) | 57507..57743 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
N0M81_RS22820 (57721) | 57721..57918 | + | 198 | Protein_70 | colicin V | - |
N0M81_RS22830 (58867) | 58867..61044 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
N0M81_RS22835 (61089) | 61089..62045 | - | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
N0M81_RS22840 (62130) | 62130..63358 | - | 1229 | Protein_74 | Enterochelin esterase | VF |
N0M81_RS22845 (63462) | 63462..67121 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
N0M81_RS22850 (67261) | 67261..68376 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
N0M81_RS22855 (69687) | 69687..70713 | - | 1027 | Protein_77 | IS481 family transposase ISKpn28 | Transposase |
N0M81_RS22860 (71267) | 71267..71466 | + | 200 | Protein_78 | lysis protein | - |
N0M81_RS22865 (71524) | 71524..71817 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
N0M81_RS22870 (72444) | 72444..73680 | + | 1237 | Protein_80 | IS3 family transposase IS2 | Transposase |
N0M81_RS22875 (74903) | 74903..76096 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
N0M81_RS22880 (76274) | 76274..76423 | + | 150 | Protein_82 | IS3 family transposase IS2 | Transposase |
N0M81_RS22885 (76733) | 76733..78122 | + | 1390 | Protein_83 | ISNCY family transposase ISKpn21 | Transposase |
N0M81_RS22895 (78954) | 78954..79222 | + | 269 | Protein_85 | IS3 family transposase ISLad1 | Transposase |
N0M81_RS22900 (79370) | 79370..79849 | - | 480 | Protein_86 | IS3 family transposase IS629 | Transposase |
N0M81_RS22905 (79933) | 79933..81441 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
N0M81_RS22910 (82114) | 82114..82853 | - | 740 | Protein_88 | IS3 family transposase IS629 | Transposase |
N0M81_RS22915 (82992) | 82992..83171 | + | 180 | Protein_89 | transposase | - |
N0M81_RS22920 (84468) | 84468..85421 | + | 954 | WP_000280980.1 | Protease 7 | VF |
N0M81_RS22925 (85854) | 85854..86963 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
N0M81_RS22930 (87032) | 87032..87934 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
N0M81_RS22935 (88308) | 88308..88496 | + | 189 | WP_001312821.1 | hypothetical protein | - |
N0M81_RS22940 (88617) | 88617..89356 | + | 740 | Protein_94 | site-specific integrase | - |
N0M81_RS22945 (89641) | 89641..90618 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
N0M81_RS22950 (91364) | 91364..91687 | + | 324 | Protein_96 | IS21 family transposase IS21 | Transposase |
N0M81_RS22955 (91689) | 91689..91793 | + | 105 | Protein_97 | AAA family ATPase | - |
N0M81_RS22960 (91854) | 91854..92367 | + | 514 | Protein_98 | DUF4113 domain-containing protein | - |
N0M81_RS22970 (93600) | 93600..94514 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
N0M81_RS22975 (94514) | 94514..95341 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
N0M81_RS22980 (95338) | 95338..96195 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
N0M81_RS22985 (96192) | 96192..97049 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
N0M81_RS22990 (97283) | 97283..97540 | - | 258 | Protein_104 | transposase | - |
N0M81_RS22995 (97538) | 97538..97951 | + | 414 | Protein_105 | phosphopyruvate hydratase | - |
N0M81_RS23000 (98292) | 98292..98672 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
N0M81_RS23005 (99052) | 99052..100245 | - | 1194 | WP_000095526.1 | MFS transporter | - |
N0M81_RS23010 (100381) | 100381..102105 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
N0M81_RS23015 (102106) | 102106..103053 | + | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
N0M81_RS23020 (103053) | 103053..104795 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
N0M81_RS23025 (104792) | 104792..106125 | + | 1334 | Protein_111 | L-lysine N6-monooxygenase | VF |
N0M81_RS23030 (106151) | 106151..108352 | + | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
N0M81_RS23035 (108837) | 108837..109534 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
N0M81_RS23040 (109834) | 109834..111000 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
N0M81_RS23045 (111000) | 111000..111971 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
N0M81_RS23050 (112608) | 112608..112777 | + | 170 | Protein_116 | hypothetical protein | - |
N0M81_RS23055 (112960) | 112960..113040 | - | 81 | Protein_117 | hypothetical protein | - |
N0M81_RS23060 (113110) | 113110..113316 | + | 207 | WP_000275856.1 | hypothetical protein | - |
N0M81_RS23065 (113342) | 113342..113881 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
N0M81_RS23070 (113949) | 113949..114182 | + | 234 | WP_000005987.1 | DUF905 family protein | - |
N0M81_RS23075 (114210) | 114210..114407 | + | 198 | Protein_121 | hypothetical protein | - |
N0M81_RS23080 (114462) | 114462..114896 | + | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
N0M81_RS23085 (114893) | 114893..115655 | + | 763 | Protein_123 | plasmid SOS inhibition protein A | - |
N0M81_RS23090 (115624) | 115624..115812 | - | 189 | WP_001299721.1 | hypothetical protein | - |
- (115624) | 115624..115848 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
- (115624) | 115624..115848 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
- (115624) | 115624..115848 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
- (115624) | 115624..115848 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
N0M81_RS23095 (115834) | 115834..115983 | + | 150 | Protein_125 | plasmid maintenance protein Mok | - |
N0M81_RS23100 (115934) | 115934..116050 | + | 117 | WP_001323520.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
N0M81_RS23105 (116270) | 116270..116500 | + | 231 | WP_071586998.1 | hypothetical protein | - |
N0M81_RS23110 (116498) | 116498..116670 | - | 173 | Protein_128 | hypothetical protein | - |
N0M81_RS23115 (116740) | 116740..116946 | + | 207 | WP_000547968.1 | hypothetical protein | - |
N0M81_RS23120 (116971) | 116971..117258 | + | 288 | WP_000107535.1 | hypothetical protein | - |
N0M81_RS23125 (117376) | 117376..118197 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
N0M81_RS23130 (118494) | 118494..119096 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
N0M81_RS23135 (119417) | 119417..119800 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
N0M81_RS23140 (119987) | 119987..120676 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
N0M81_RS23145 (120769) | 120769..121170 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
N0M81_RS23150 (121203) | 121203..121568 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
N0M81_RS23155 (121583) | 121583..121894 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
N0M81_RS23160 (121916) | 121916..122482 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
N0M81_RS23165 (122469) | 122469..123197 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
N0M81_RS23170 (123197) | 123197..124624 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
N0M81_RS23175 (124614) | 124614..125204 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
N0M81_RS23180 (125191) | 125191..125388 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
N0M81_RS23185 (125400) | 125400..125651 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
N0M81_RS23190 (125648) | 125648..126163 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
N0M81_RS23195 (126298) | 126298..126519 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
N0M81_RS23200 (126679) | 126679..129306 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
N0M81_RS23205 (129303) | 129303..129689 | + | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
N0M81_RS23210 (129686) | 129686..130319 | + | 634 | Protein_148 | type-F conjugative transfer system protein TraW | - |
N0M81_RS23215 (130316) | 130316..131309 | + | 994 | Protein_149 | conjugal transfer pilus assembly protein TraU | - |
N0M81_RS23220 (131318) | 131318..131956 | + | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
N0M81_RS23225 (131953) | 131953..133761 | + | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
N0M81_RS23230 (133788) | 133788..134045 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
N0M81_RS23235 (134038) | 134038..134781 | + | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
N0M81_RS23240 (134797) | 134797..135144 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
N0M81_RS23245 (135146) | 135146..135460 | - | 315 | WP_001324103.1 | hypothetical protein | - |
N0M81_RS23250 (135541) | 135541..135825 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
N0M81_RS23255 (135812) | 135812..136357 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
N0M81_RS23260 (136287) | 136287..136628 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
N0M81_RS23265 (136615) | 136615..136995 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
N0M81_RS23270 (136995) | 136995..138368 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
N0M81_RS23275 (138365) | 138365..141187 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
N0M81_RS23280 (141203) | 141203..141700 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
N0M81_RS23285 (141732) | 141732..142463 | + | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
N0M81_RS23290 (142716) | 142716..144869 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
N0M81_RS23295 (144878) | 144878..145276 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
N0M81_RS23300 (145276) | 145276..145503 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
N0M81_RS23305 (145585) | 145585..150855 | + | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
N0M81_RS23310 (150875) | 150875..151621 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
N0M81_RS23315 (151680) | 151680..152540 | + | 861 | WP_000704514.1 | putative protein YcjY | VF |
N0M81_RS23320 (152643) | 152643..153203 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
N0M81_RS23325 (153339) | 153339..153551 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
N0M81_RS23330 (153797) | 153797..153871 | + | 75 | Protein_172 | endonuclease | - |
- (154127) | 154127..154188 | - | 62 | NuclAT_1 | - | - |
- (154127) | 154127..154188 | - | 62 | NuclAT_1 | - | - |
- (154127) | 154127..154188 | - | 62 | NuclAT_1 | - | - |
- (154127) | 154127..154188 | - | 62 | NuclAT_1 | - | - |
N0M81_RS23335 (154232) | 154232..154381 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|