NZ_CP1040781..154403

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 154403 bp
Accession: NZ_CP104078        Location: 1..154403         Organism: Escherichia coli strain HB42       Replicon: plasmid pHB42-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N0M81_RS22470 (262) 262..519 + 258 WP_000083845.1 replication regulatory protein RepA -
N0M81_RS22475 (536) 536..787 - 252 WP_223195197.1 replication protein RepA -
N0M81_RS22480 (778) 778..825 + 48 WP_229471593.1 hypothetical protein -
N0M81_RS22485 (1292) 1292..2149 + 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
N0M81_RS22490 (2849) 2849..2989 + 141 WP_001333237.1 hypothetical protein -
N0M81_RS22495 (3087) 3087..3740 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
N0M81_RS22500 (3833) 3833..4090 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
N0M81_RS22505 (4023) 4023..4424 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
N0M81_RS22510 (4709) 4709..6019 + 1311 WP_001262765.1 DUF262 domain-containing protein -
N0M81_RS22515 (6048) 6048..6146 + 99 Protein_9 IS1 family transposase -
N0M81_RS22520 (6296) 6296..7156 - 861 WP_000027057.1 Beta-lactamase TEM ARG
N0M81_RS22525 (7288) 7288..7992 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
N0M81_RS22530 (8097) 8097..8255 + 159 Protein_12 chromate resistance protein -
N0M81_RS22535 (8883) 8883..10254 - 1372 Protein_13 IS1182 family transposase ISCfr1 Transposase
N0M81_RS22540 (10369) 10369..11505 - 1137 WP_000080860.1 DUF3883 domain-containing protein -
N0M81_RS22545 (11556) 11556..11783 - 228 WP_000248278.1 hypothetical protein -
N0M81_RS22550 (11807) 11807..11998 + 192 WP_000951934.1 hypothetical protein -
N0M81_RS22555 (12480) 12480..13022 - 543 WP_000587837.1 AAA family ATPase -
N0M81_RS22560 (13035) 13035..13895 - 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
N0M81_RS22565 (14038) 14038..14943 + 906 Protein_19 IS4 family transposase IS10R Transposase
N0M81_RS22570 (14992) 14992..15696 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
N0M81_RS22575 (15820) 15820..17070 + 1251 Protein_21 transposase -
N0M81_RS22580 (17135) 17135..17839 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
N0M81_RS22585 (17961) 17961..18866 + 906 WP_000219391.1 hypothetical protein ARG
N0M81_RS22590 (18863) 18863..20101 + 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
N0M81_RS22595 (20101) 20101..20685 + 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
N0M81_RS22600 (21178) 21178..21942 - 765 WP_001389365.1 IS6-like element IS6100 family transposase -
N0M81_RS22605 (22060) 22060..22125 - 66 Protein_27 EAL domain-containing protein -
N0M81_RS22610 (22169) 22169..22474 - 306 WP_000130000.1 hypothetical protein Relaxase
N0M81_RS22615 (22484) 22484..22840 - 357 Protein_29 chromate transporter -
N0M81_RS22620 (22897) 22897..23594 + 698 WP_095033700.1 IS1-like element IS1B family transposase -
N0M81_RS22625 (23848) 23848..24870 - 1023 WP_000361402.1 helicase UvrD -
N0M81_RS22630 (24855) 24855..26420 - 1566 WP_001128474.1 AAA family ATPase -
N0M81_RS22635 (26495) 26495..26911 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N0M81_RS22640 (26908) 26908..27138 - 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
N0M81_RS22645 (27519) 27519..31313 + 3795 WP_259904975.1 pcar -
N0M81_RS22650 (31358) 31358..31774 - 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N0M81_RS22655 (31771) 31771..32001 - 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
N0M81_RS22660 (32266) 32266..32766 + 501 WP_000528931.1 HEPN family nuclease -
N0M81_RS22665 (32779) 32779..33552 + 774 WP_000905949.1 hypothetical protein -
N0M81_RS22670 (33719) 33719..34852 + 1134 WP_000545987.1 DUF3800 domain-containing protein -
N0M81_RS22675 (34886) 34886..35398 - 513 WP_000151784.1 hypothetical protein -
N0M81_RS22680 (35938) 35938..36288 + 351 WP_000493378.1 hypothetical protein -
N0M81_RS22685 (36339) 36339..37082 + 744 WP_000129823.1 hypothetical protein -
N0M81_RS22690 (37079) 37079..37855 + 777 WP_000015958.1 site-specific integrase -
N0M81_RS22695 (37913) 37913..38170 - 258 WP_000764642.1 hypothetical protein -
N0M81_RS22700 (38299) 38299..38403 - 105 WP_032409716.1 hypothetical protein -
N0M81_RS22705 (38633) 38633..38821 + 189 WP_000957857.1 hypothetical protein -
N0M81_RS22710 (38831) 38831..40030 + 1200 WP_000948429.1 IS91 family transposase ISSbo1 Transposase
N0M81_RS22715 (40203) 40203..40565 + 363 Protein_49 FidL-like protein -
N0M81_RS22720 (40570) 40570..40986 - 417 WP_014839980.1 Glutathione transferase FosA ARG
N0M81_RS22725 (41246) 41246..41563 - 318 Protein_51 IS5/IS1182 family transposase -
N0M81_RS22730 (41598) 41598..42473 - 876 WP_001617865.1 Beta-lactamase CTX-M-97 ARG
N0M81_RS22735 (42776) 42776..43480 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
N0M81_RS22740 (43546) 43546..45060 + 1515 Protein_54 Tn3 family transposase TnpA_TnAs1 Transposase
N0M81_RS22745 (45170) 45170..45448 + 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB -
N0M81_RS22750 (45494) 45494..46342 + 849 WP_023154360.1 3'-5' exonuclease -
N0M81_RS22755 (46459) 46459..46941 + 483 WP_001311056.1 hypothetical protein -
N0M81_RS22760 (47243) 47243..47590 + 348 WP_000142450.1 DUF6404 family protein -
N0M81_RS22765 (47608) 47608..47793 - 186 Protein_59 hypothetical protein -
N0M81_RS22770 (48019) 48019..51834 + 3816 WP_223364258.1 hypothetical protein -
N0M81_RS22775 (52366) 52366..52716 + 351 WP_000493379.1 hypothetical protein -
N0M81_RS22780 (52760) 52760..53449 + 690 WP_000796228.1 hypothetical protein -
N0M81_RS22785 (53446) 53446..54237 + 792 WP_000016493.1 site-specific integrase -
N0M81_RS22790 (54415) 54415..54768 + 354 WP_000864812.1 colicin M immunity protein -
N0M81_RS22795 (54818) 54818..55633 - 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
N0M81_RS22800 (55877) 55877..56404 + 528 WP_000203272.1 colicin B immunity protein -
N0M81_RS22805 (56422) 56422..56589 - 168 Protein_67 colicin-B -
N0M81_RS22810 (56762) 56762..56965 + 204 Protein_68 hypothetical protein -
N0M81_RS22815 (57507) 57507..57743 + 237 WP_014640552.1 colicin V immunity protein -
N0M81_RS22820 (57721) 57721..57918 + 198 Protein_70 colicin V -
N0M81_RS22830 (58867) 58867..61044 + 2178 WP_001222186.1 Ferric enterobactin receptor VF
N0M81_RS22835 (61089) 61089..62045 - 957 WP_064055648.1 Ferri-bacillibactin esterase BesA VF
N0M81_RS22840 (62130) 62130..63358 - 1229 Protein_74 Enterochelin esterase VF
N0M81_RS22845 (63462) 63462..67121 - 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
N0M81_RS22850 (67261) 67261..68376 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
N0M81_RS22855 (69687) 69687..70713 - 1027 Protein_77 IS481 family transposase ISKpn28 Transposase
N0M81_RS22860 (71267) 71267..71466 + 200 Protein_78 lysis protein -
N0M81_RS22865 (71524) 71524..71817 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
N0M81_RS22870 (72444) 72444..73680 + 1237 Protein_80 IS3 family transposase IS2 Transposase
N0M81_RS22875 (74903) 74903..76096 + 1194 WP_000450494.1 GTP-binding protein -
N0M81_RS22880 (76274) 76274..76423 + 150 Protein_82 IS3 family transposase IS2 Transposase
N0M81_RS22885 (76733) 76733..78122 + 1390 Protein_83 ISNCY family transposase ISKpn21 Transposase
N0M81_RS22895 (78954) 78954..79222 + 269 Protein_85 IS3 family transposase ISLad1 Transposase
N0M81_RS22900 (79370) 79370..79849 - 480 Protein_86 IS3 family transposase IS629 Transposase
N0M81_RS22905 (79933) 79933..81441 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
N0M81_RS22910 (82114) 82114..82853 - 740 Protein_88 IS3 family transposase IS629 Transposase
N0M81_RS22915 (82992) 82992..83171 + 180 Protein_89 transposase -
N0M81_RS22920 (84468) 84468..85421 + 954 WP_000280980.1 Protease 7 VF
N0M81_RS22925 (85854) 85854..86963 + 1110 WP_000771475.1 SDR family oxidoreductase -
N0M81_RS22930 (87032) 87032..87934 + 903 WP_001312822.1 hypothetical protein VF
N0M81_RS22935 (88308) 88308..88496 + 189 WP_001312821.1 hypothetical protein -
N0M81_RS22940 (88617) 88617..89356 + 740 Protein_94 site-specific integrase -
N0M81_RS22945 (89641) 89641..90618 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
N0M81_RS22950 (91364) 91364..91687 + 324 Protein_96 IS21 family transposase IS21 Transposase
N0M81_RS22955 (91689) 91689..91793 + 105 Protein_97 AAA family ATPase -
N0M81_RS22960 (91854) 91854..92367 + 514 Protein_98 DUF4113 domain-containing protein -
N0M81_RS22970 (93600) 93600..94514 + 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
N0M81_RS22975 (94514) 94514..95341 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
N0M81_RS22980 (95338) 95338..96195 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
N0M81_RS22985 (96192) 96192..97049 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
N0M81_RS22990 (97283) 97283..97540 - 258 Protein_104 transposase -
N0M81_RS22995 (97538) 97538..97951 + 414 Protein_105 phosphopyruvate hydratase -
N0M81_RS23000 (98292) 98292..98672 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
N0M81_RS23005 (99052) 99052..100245 - 1194 WP_000095526.1 MFS transporter -
N0M81_RS23010 (100381) 100381..102105 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
N0M81_RS23015 (102106) 102106..103053 + 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
N0M81_RS23020 (103053) 103053..104795 + 1743 WP_001015721.1 Aerobactin synthase VF
N0M81_RS23025 (104792) 104792..106125 + 1334 Protein_111 L-lysine N6-monooxygenase VF
N0M81_RS23030 (106151) 106151..108352 + 2202 WP_000973520.1 Ferric aerobactin receptor VF
N0M81_RS23035 (108837) 108837..109534 + 698 WP_094096600.1 IS1-like element IS1A family transposase -
N0M81_RS23040 (109834) 109834..111000 + 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
N0M81_RS23045 (111000) 111000..111971 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
N0M81_RS23050 (112608) 112608..112777 + 170 Protein_116 hypothetical protein -
N0M81_RS23055 (112960) 112960..113040 - 81 Protein_117 hypothetical protein -
N0M81_RS23060 (113110) 113110..113316 + 207 WP_000275856.1 hypothetical protein -
N0M81_RS23065 (113342) 113342..113881 + 540 WP_000290840.1 single-stranded DNA-binding protein -
N0M81_RS23070 (113949) 113949..114182 + 234 WP_000005987.1 DUF905 family protein -
N0M81_RS23075 (114210) 114210..114407 + 198 Protein_121 hypothetical protein -
N0M81_RS23080 (114462) 114462..114896 + 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
N0M81_RS23085 (114893) 114893..115655 + 763 Protein_123 plasmid SOS inhibition protein A -
N0M81_RS23090 (115624) 115624..115812 - 189 WP_001299721.1 hypothetical protein -
- (115624) 115624..115848 + 225 NuclAT_0 - Antitoxin Detail
- (115624) 115624..115848 + 225 NuclAT_0 - Antitoxin Detail
- (115624) 115624..115848 + 225 NuclAT_0 - Antitoxin Detail
- (115624) 115624..115848 + 225 NuclAT_0 - Antitoxin Detail
N0M81_RS23095 (115834) 115834..115983 + 150 Protein_125 plasmid maintenance protein Mok -
N0M81_RS23100 (115934) 115934..116050 + 117 WP_001323520.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
N0M81_RS23105 (116270) 116270..116500 + 231 WP_071586998.1 hypothetical protein -
N0M81_RS23110 (116498) 116498..116670 - 173 Protein_128 hypothetical protein -
N0M81_RS23115 (116740) 116740..116946 + 207 WP_000547968.1 hypothetical protein -
N0M81_RS23120 (116971) 116971..117258 + 288 WP_000107535.1 hypothetical protein -
N0M81_RS23125 (117376) 117376..118197 + 822 WP_001234426.1 DUF932 domain-containing protein -
N0M81_RS23130 (118494) 118494..119096 - 603 WP_000243712.1 hypothetical protein VF
N0M81_RS23135 (119417) 119417..119800 + 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
N0M81_RS23140 (119987) 119987..120676 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
N0M81_RS23145 (120769) 120769..121170 + 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
N0M81_RS23150 (121203) 121203..121568 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
N0M81_RS23155 (121583) 121583..121894 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
N0M81_RS23160 (121916) 121916..122482 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
N0M81_RS23165 (122469) 122469..123197 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
N0M81_RS23170 (123197) 123197..124624 + 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
N0M81_RS23175 (124614) 124614..125204 + 591 WP_001376242.1 conjugal transfer pilus-stabilizing protein TraP -
N0M81_RS23180 (125191) 125191..125388 + 198 WP_001324648.1 conjugal transfer protein TrbD -
N0M81_RS23185 (125400) 125400..125651 + 252 WP_001038342.1 conjugal transfer protein TrbG -
N0M81_RS23190 (125648) 125648..126163 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
N0M81_RS23195 (126298) 126298..126519 + 222 WP_001278689.1 conjugal transfer protein TraR -
N0M81_RS23200 (126679) 126679..129306 + 2628 WP_001064245.1 type IV secretion system protein TraC -
N0M81_RS23205 (129303) 129303..129689 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
N0M81_RS23210 (129686) 129686..130319 + 634 Protein_148 type-F conjugative transfer system protein TraW -
N0M81_RS23215 (130316) 130316..131309 + 994 Protein_149 conjugal transfer pilus assembly protein TraU -
N0M81_RS23220 (131318) 131318..131956 + 639 WP_000777700.1 type-F conjugative transfer system pilin assembly protein TrbC -
N0M81_RS23225 (131953) 131953..133761 + 1809 WP_000821841.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
N0M81_RS23230 (133788) 133788..134045 + 258 WP_000864318.1 conjugal transfer protein TrbE -
N0M81_RS23235 (134038) 134038..134781 + 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
N0M81_RS23240 (134797) 134797..135144 + 348 WP_001287910.1 conjugal transfer protein TrbA -
N0M81_RS23245 (135146) 135146..135460 - 315 WP_001324103.1 hypothetical protein -
N0M81_RS23250 (135541) 135541..135825 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
N0M81_RS23255 (135812) 135812..136357 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
N0M81_RS23260 (136287) 136287..136628 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
N0M81_RS23265 (136615) 136615..136995 + 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
N0M81_RS23270 (136995) 136995..138368 + 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
N0M81_RS23275 (138365) 138365..141187 + 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
N0M81_RS23280 (141203) 141203..141700 + 498 WP_000605857.1 entry exclusion protein -
N0M81_RS23285 (141732) 141732..142463 + 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
N0M81_RS23290 (142716) 142716..144869 + 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
N0M81_RS23295 (144878) 144878..145276 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N0M81_RS23300 (145276) 145276..145503 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
N0M81_RS23305 (145585) 145585..150855 + 5271 WP_000986962.1 Multifunctional conjugation protein TraI Relaxase
N0M81_RS23310 (150875) 150875..151621 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
N0M81_RS23315 (151680) 151680..152540 + 861 WP_000704514.1 putative protein YcjY VF
N0M81_RS23320 (152643) 152643..153203 + 561 WP_000139315.1 fertility inhibition protein FinO -
N0M81_RS23325 (153339) 153339..153551 + 213 WP_001299730.1 ANR family transcriptional regulator -
N0M81_RS23330 (153797) 153797..153871 + 75 Protein_172 endonuclease -
- (154127) 154127..154188 - 62 NuclAT_1 - -
- (154127) 154127..154188 - 62 NuclAT_1 - -
- (154127) 154127..154188 - 62 NuclAT_1 - -
- (154127) 154127..154188 - 62 NuclAT_1 - -
N0M81_RS23335 (154232) 154232..154381 + 150 WP_001312851.1 Hok/Gef family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance