MGE detailed information
MGE type: Prophage MGE length: 38310 bp
Accession: NZ_CP102669 Location: 2164367..2202676 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP102669 Location: 2164367..2202676 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUW86_RS10680 () | 2160640..2161281 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NUW86_RS10685 () | 2161381..2162559 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NUW86_RS10690 () | 2162690..2162980 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NUW86_RS10695 () | 2163048..2163401 | + | 354 | WP_001042119.1 | protein YebF | - |
| NUW86_RS10700 () | 2163495..2164154 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NUW86_RS10705 () | 2164367..2166418 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NUW86_RS10710 () | 2166453..2167151 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NUW86_RS10715 () | 2167175..2167831 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NUW86_RS10720 () | 2167939..2168169 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NUW86_RS10725 () | 2168307..2168681 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NUW86_RS10730 () | 2168682..2169557 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NUW86_RS10735 () | 2169574..2169927 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2170027..2170172 | - | 146 | - | - | Antitoxin Detail |
| - | 2170067..2170170 | + | 104 | - | - | Toxin Detail |
| NUW86_RS10740 () | 2170301..2171224 | - | 924 | Protein_2101 | hypothetical protein ; Integrase | Integrase |
| NUW86_RS10745 () | 2171488..2171949 | - | 462 | Protein_2102 | DNA breaking-rejoining protein | - |
| NUW86_RS10750 () | 2171938..2172129 | + | 192 | Protein_2103 | glycoside hydrolase family 19 protein | - |
| NUW86_RS10755 () | 2172183..2172716 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NUW86_RS10760 () | 2172973..2173140 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NUW86_RS10765 () | 2173205..2173393 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NUW86_RS10770 () | 2173448..2173708 | + | 261 | Protein_2107 | DUF1441 family protein | - |
| NUW86_RS10775 () | 2173923..2174267 | + | 345 | Protein_2108 | macro domain-containing protein | - |
| NUW86_RS10780 () | 2174277..2174747 | + | 471 | Protein_2109 | tail fiber assembly protein | - |
| NUW86_RS10785 () | 2174844..2175044 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NUW86_RS10790 () | 2175434..2175614 | - | 181 | Protein_2111 | IS3 family transposase | - |
| NUW86_RS10795 () | 2175605..2175706 | + | 102 | Protein_2112 | arsenic transporter | - |
| NUW86_RS10800 () | 2176328..2176560 | + | 233 | Protein_2113 | helix-turn-helix domain-containing protein | - |
| NUW86_RS10805 () | 2176887..2177501 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NUW86_RS10810 () | 2177511..2177669 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NUW86_RS10815 () | 2177802..2178716 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NUW86_RS10820 () | 2180020..2180442 | - | 423 | Protein_2117 | hypothetical protein ; Integrase | Integrase |
| NUW86_RS10825 () | 2180512..2181706 | + | 1195 | Protein_2118 | IS256 family transposase IS285 | Transposase |
| NUW86_RS10830 () | 2181852..2181992 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NUW86_RS10835 () | 2182158..2182427 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NUW86_RS10840 () | 2182797..2183216 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NUW86_RS10845 () | 2183604..2184080 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NUW86_RS10850 () | 2184410..2184805 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NUW86_RS10855 () | 2185489..2186211 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NUW86_RS10860 () | 2186496..2186660 | + | 165 | WP_001134856.1 | membrane protein | - |
| NUW86_RS10865 () | 2186884..2187534 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NUW86_RS10870 () | 2187553..2187744 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NUW86_RS10875 () | 2187855..2188091 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NUW86_RS10880 () | 2188209..2189648 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NUW86_RS10885 () | 2189726..2192359 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NUW86_RS10890 () | 2192328..2193611 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NUW86_RS10895 () | 2193740..2194237 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NUW86_RS10900 () | 2194335..2195021 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NUW86_RS10905 () | 2195041..2197089 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| NUW86_RS10910 () | 2197283..2198164 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NUW86_RS10915 () | 2198212..2199585 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NUW86_RS10920 () | 2199761..2200552 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NUW86_RS10925 () | 2200764..2201003 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NUW86_RS10930 () | 2201161..2201304 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NUW86_RS10935 () | 2201375..2201662 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NUW86_RS10940 () | 2202311..2202454 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NUW86_RS10945 () | 2202467..2202676 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NUW86_RS10950 () | 2202896..2204641 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NUW86_RS10955 () | 2204707..2205516 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NUW86_RS10960 () | 2205513..2206079 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NUW86_RS10965 () | 2206489..2206947 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |