MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP101907 Location: 3398677..3407328 Organism: Salmonella enterica subsp. enterica strain QA-1986 973 Replicon: chromosome
Accession: NZ_CP101907 Location: 3398677..3407328 Organism: Salmonella enterica subsp. enterica strain QA-1986 973 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP441_RS16605 (3394481) | 3394481..3395584 | + | 1104 | WP_001528146.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| NP441_RS16610 (3395668) | 3395668..3395802 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| NP441_RS16615 (3395780) | 3395780..3396163 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| NP441_RS16620 (3396585) | 3396585..3397694 | + | 1110 | WP_023250616.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| NP441_RS16625 (3397754) | 3397754..3398680 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| NP441_RS16630 (3398677) | 3398677..3399954 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| NP441_RS16635 (3399951) | 3399951..3400718 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| NP441_RS16640 (3400720) | 3400720..3401433 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| NP441_RS16645 (3401565) | 3401565..3401786 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NP441_RS16650 (3401783) | 3401783..3402151 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NP441_RS16655 (3402410) | 3402410..3403726 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| NP441_RS16660 (3403790) | 3403790..3404677 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| NP441_RS16665 (3404674) | 3404674..3405519 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| NP441_RS16670 (3405521) | 3405521..3406591 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| NP441_RS16675 (3406588) | 3406588..3407328 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| NP441_RS16680 (3407341) | 3407341..3407757 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| NP441_RS16685 (3407883) | 3407883..3409625 | + | 1743 | WP_058653089.1 | gamma-glutamyltransferase | - |
| NP441_RS16690 (3409670) | 3409670..3410704 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| NP441_RS16695 (3410701) | 3410701..3411672 | - | 972 | WP_058653090.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |