MGE detailed information
MGE type: Prophage MGE length: 38318 bp
Accession: NZ_CP101388 Location: 2124791..2163108 Organism: Salmonella enterica strain SC2017167 Replicon: chromosome
Accession: NZ_CP101388 Location: 2124791..2163108 Organism: Salmonella enterica strain SC2017167 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU38_RS10415 () | 2121064..2121705 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NMU38_RS10420 () | 2121805..2122983 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NMU38_RS10425 () | 2123114..2123404 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NMU38_RS10430 () | 2123472..2123825 | + | 354 | WP_001042119.1 | protein YebF | - |
| NMU38_RS10435 () | 2123919..2124578 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NMU38_RS10440 () | 2124791..2126842 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NMU38_RS10445 () | 2126877..2127575 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NMU38_RS10450 () | 2127599..2128255 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NMU38_RS10455 () | 2128363..2128593 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NMU38_RS10460 () | 2128731..2129105 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NMU38_RS10465 () | 2129106..2129981 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NMU38_RS10470 () | 2129998..2130351 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2130451..2130596 | - | 146 | - | - | Antitoxin Detail |
| - | 2130491..2130594 | + | 104 | - | - | Toxin Detail |
| NMU38_RS10475 () | 2130725..2131648 | - | 924 | Protein_2049 | hypothetical protein ; Integrase | Integrase |
| NMU38_RS10480 () | 2131912..2132373 | - | 462 | Protein_2050 | DNA breaking-rejoining protein | - |
| NMU38_RS10485 () | 2132362..2132553 | + | 192 | Protein_2051 | glycoside hydrolase family 19 protein | - |
| NMU38_RS10490 () | 2132607..2133140 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NMU38_RS10495 () | 2133397..2133564 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NMU38_RS10500 () | 2133629..2133817 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NMU38_RS10505 () | 2133872..2134132 | + | 261 | Protein_2055 | DUF1441 family protein | - |
| NMU38_RS10510 () | 2134347..2134691 | + | 345 | Protein_2056 | macro domain-containing protein | - |
| NMU38_RS10515 () | 2134701..2135171 | + | 471 | Protein_2057 | tail fiber assembly protein | - |
| NMU38_RS10520 () | 2135268..2135495 | - | 228 | WP_010989049.1 | PagK family vesicle-borne virulence factor | - |
| NMU38_RS10525 () | 2135858..2136038 | - | 181 | Protein_2059 | IS3 family transposase | - |
| NMU38_RS10530 () | 2136029..2136130 | + | 102 | Protein_2060 | arsenic transporter | - |
| NMU38_RS10535 () | 2136752..2136984 | + | 233 | Protein_2061 | helix-turn-helix domain-containing protein | - |
| NMU38_RS10540 () | 2137311..2137925 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NMU38_RS10545 () | 2137935..2138093 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NMU38_RS10550 () | 2138226..2139140 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NMU38_RS10555 () | 2140453..2140875 | - | 423 | Protein_2065 | hypothetical protein ; Integrase | Integrase |
| NMU38_RS10560 () | 2140945..2142139 | + | 1195 | Protein_2066 | IS256 family transposase IS285 | Transposase |
| NMU38_RS10565 () | 2142285..2142425 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NMU38_RS10570 () | 2142591..2142860 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NMU38_RS10575 () | 2143230..2143649 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NMU38_RS10580 () | 2144037..2144513 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NMU38_RS10585 () | 2144843..2145238 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NMU38_RS10590 () | 2145921..2146643 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NMU38_RS10595 () | 2146928..2147092 | + | 165 | WP_001134856.1 | membrane protein | - |
| NMU38_RS10600 () | 2147316..2147966 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NMU38_RS10605 () | 2147985..2148176 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NMU38_RS10610 () | 2148287..2148523 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NMU38_RS10615 () | 2148641..2150080 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NMU38_RS10620 () | 2150158..2152791 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NMU38_RS10625 () | 2152760..2154043 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NMU38_RS10630 () | 2154172..2154669 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NMU38_RS10635 () | 2154767..2155453 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NMU38_RS10640 () | 2155473..2157521 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| NMU38_RS10645 () | 2157715..2158596 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NMU38_RS10650 () | 2158644..2160017 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NMU38_RS10655 () | 2160193..2160984 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NMU38_RS10660 () | 2161196..2161435 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NMU38_RS10665 () | 2161593..2161736 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NMU38_RS10670 () | 2161807..2162094 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NMU38_RS10675 () | 2162743..2162886 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NMU38_RS10680 () | 2162899..2163108 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NMU38_RS10685 () | 2163328..2165073 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NMU38_RS10690 () | 2165139..2165948 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NMU38_RS10695 () | 2165945..2166511 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NMU38_RS10700 () | 2166921..2167379 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |