MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP101386 Location: 960422..971747 Organism: Salmonella enterica strain SC2017100 Replicon: chromosome
Accession: NZ_CP101386 Location: 960422..971747 Organism: Salmonella enterica strain SC2017100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU37_RS04685 (955868) | 955868..956966 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| NMU37_RS04690 (956976) | 956976..958493 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NMU37_RS04695 (958569) | 958569..959114 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NMU37_RS04700 (959379) | 959379..960137 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| NMU37_RS04710 (960422) | 960422..961228 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| NMU37_RS04715 (961503) | 961503..961754 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| NMU37_RS04720 (961931) | 961931..962158 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NMU37_RS04725 (962158) | 962158..962556 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NMU37_RS04730 (963362) | 963362..963898 | + | 537 | WP_001038506.1 | hypothetical protein | VF |
| NMU37_RS04735 (963945) | 963945..964577 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| NMU37_RS04740 (965296) | 965296..965880 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| NMU37_RS04745 (966000) | 966000..968489 | + | 2490 | WP_000705483.1 | hypothetical protein | VF |
| NMU37_RS04750 (968530) | 968530..969273 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| NMU37_RS04755 (969270) | 969270..970346 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| NMU37_RS04760 (970490) | 970490..971002 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| NMU37_RS04765 (970989) | 970989..971747 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| NMU37_RS04770 (971957) | 971957..972823 | - | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| NMU37_RS04775 (972945) | 972945..973217 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NMU37_RS04780 (973248) | 973248..974477 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| NMU37_RS04785 (974619) | 974619..975074 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NMU37_RS04790 (975178) | 975178..976041 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |