MGE detailed information
MGE type: Prophage MGE length: 40359 bp
Accession: NZ_CP101379 Location: 2115963..2156321 Organism: Salmonella enterica strain SC2016290 Replicon: chromosome
Accession: NZ_CP101379 Location: 2115963..2156321 Organism: Salmonella enterica strain SC2016290 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU35_RS10390 () | 2112064..2113875 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NMU35_RS10395 () | 2113913..2114554 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NMU35_RS10400 () | 2114654..2115832 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NMU35_RS10405 () | 2115963..2116253 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NMU35_RS10410 () | 2116321..2116674 | + | 354 | WP_001042119.1 | protein YebF | - |
| NMU35_RS10415 () | 2116768..2117427 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NMU35_RS10420 () | 2117640..2119691 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NMU35_RS10425 () | 2119726..2120424 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NMU35_RS10430 () | 2120448..2121104 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NMU35_RS10435 () | 2121212..2121442 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NMU35_RS10440 () | 2121580..2121954 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NMU35_RS10445 () | 2121955..2122830 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NMU35_RS10450 () | 2122847..2123200 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2123300..2123445 | - | 146 | - | - | Antitoxin Detail |
| - | 2123340..2123443 | + | 104 | - | - | Toxin Detail |
| NMU35_RS10455 () | 2123574..2124497 | - | 924 | Protein_2045 | hypothetical protein ; Integrase | Integrase |
| NMU35_RS10460 () | 2124761..2125222 | - | 462 | Protein_2046 | DNA breaking-rejoining protein | - |
| NMU35_RS10465 () | 2125211..2125402 | + | 192 | Protein_2047 | glycoside hydrolase family 19 protein | - |
| NMU35_RS10470 () | 2125456..2125989 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NMU35_RS10475 () | 2126246..2126413 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NMU35_RS10480 () | 2126478..2126666 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NMU35_RS10485 () | 2126721..2126981 | + | 261 | Protein_2051 | DUF1441 family protein | - |
| NMU35_RS10490 () | 2127196..2127540 | + | 345 | Protein_2052 | macro domain-containing protein | - |
| NMU35_RS10495 () | 2127550..2128020 | + | 471 | Protein_2053 | tail fiber assembly protein | - |
| NMU35_RS10500 () | 2128117..2128344 | - | 228 | WP_010989049.1 | PagK family vesicle-borne virulence factor | - |
| NMU35_RS10505 () | 2128707..2128887 | - | 181 | Protein_2055 | IS3 family transposase | - |
| NMU35_RS10510 () | 2128878..2128979 | + | 102 | Protein_2056 | arsenic transporter | - |
| NMU35_RS10515 () | 2129601..2129833 | + | 233 | Protein_2057 | helix-turn-helix domain-containing protein | - |
| NMU35_RS10520 () | 2130160..2130774 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NMU35_RS10525 () | 2130784..2130942 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NMU35_RS10530 () | 2131075..2131989 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NMU35_RS10535 () | 2133302..2133724 | - | 423 | Protein_2061 | hypothetical protein ; Integrase | Integrase |
| NMU35_RS10540 () | 2133794..2134988 | + | 1195 | Protein_2062 | IS256 family transposase IS285 | Transposase |
| NMU35_RS10545 () | 2135134..2135274 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NMU35_RS10550 () | 2135440..2135709 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NMU35_RS10555 () | 2136079..2136498 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NMU35_RS10560 () | 2136886..2137362 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NMU35_RS10565 () | 2137692..2138087 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NMU35_RS10570 () | 2138770..2139492 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| NMU35_RS10575 () | 2139777..2139875 | + | 99 | Protein_2069 | hypothetical protein | - |
| NMU35_RS10580 () | 2139929..2140243 | + | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| NMU35_RS10585 () | 2140318..2141061 | + | 744 | WP_229038580.1 | IS3 family transposase ISKpn40 | Transposase |
| NMU35_RS10590 () | 2141090..2141179 | + | 90 | Protein_2072 | serine/threonine-protein phosphatase | - |
| NMU35_RS10595 () | 2141198..2141389 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NMU35_RS10600 () | 2141500..2141736 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NMU35_RS10605 () | 2141854..2143293 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NMU35_RS10610 () | 2143371..2146004 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| NMU35_RS10615 () | 2145973..2147256 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NMU35_RS10620 () | 2147385..2147882 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NMU35_RS10625 () | 2147980..2148666 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NMU35_RS10630 () | 2148686..2150734 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| NMU35_RS10635 () | 2150928..2151809 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NMU35_RS10640 () | 2151857..2153230 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NMU35_RS10645 () | 2153406..2154197 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NMU35_RS10650 () | 2154409..2154648 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NMU35_RS10655 () | 2154806..2154949 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NMU35_RS10660 () | 2155020..2155307 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NMU35_RS10665 () | 2155956..2156099 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NMU35_RS10670 () | 2156112..2156321 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NMU35_RS10675 () | 2156541..2158286 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NMU35_RS10680 () | 2158352..2159161 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NMU35_RS10685 () | 2159158..2159724 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NMU35_RS10690 () | 2160134..2160592 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.003 |