NZ_CP101376879681..891006

MGE detailed information

MGE type: Genomic_island        MGE length: 11326 bp
Accession: NZ_CP101376        Location: 879681..891006         Organism: Salmonella enterica strain SC2016091       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NMU34_RS04255 (875127) 875127..876225 + 1099 WP_010989230.1 peptide chain release factor 2 -
NMU34_RS04260 (876235) 876235..877752 + 1518 WP_000003339.1 lysine--tRNA ligase -
NMU34_RS04265 (877828) 877828..878373 - 546 WP_000133994.1 isopentenyl-diphosphate Delta-isomerase -
NMU34_RS04270 (878638) 878638..879396 + 759 WP_000244329.1 amidase activator ActS -
NMU34_RS04280 (879681) 879681..880487 - 807 WP_010989071.1 DUF1460 domain-containing protein -
NMU34_RS04285 (880762) 880762..881013 - 252 WP_001540858.1 hypothetical protein -
NMU34_RS04290 (881190) 881190..881417 + 228 WP_000557549.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
NMU34_RS04295 (881417) 881417..881815 + 399 WP_000911336.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
NMU34_RS04300 (882621) 882621..883157 + 537 WP_001038506.1 Attachment invasion locus protein VF
NMU34_RS04305 (883204) 883204..883836 + 633 WP_000835265.1 YfdX family protein -
NMU34_RS04310 (884555) 884555..885139 + 585 WP_001244638.1 putative fimbrial-like protein YbgD VF
NMU34_RS04315 (885259) 885259..887748 + 2490 WP_000705483.1 Outer membrane usher protein PapC VF
NMU34_RS04320 (887789) 887789..888532 + 744 WP_000798504.1 Chaperone protein PapD VF
NMU34_RS04325 (888529) 888529..889605 + 1077 WP_000141329.1 outer membrane protein -
NMU34_RS04330 (889749) 889749..890261 + 513 WP_000336259.1 CaiF/GrlA family transcriptional regulator -
NMU34_RS04335 (890248) 890248..891006 + 759 WP_000134791.1 transcriptional regulator -
NMU34_RS04340 (891216) 891216..892070 - 855 WP_000503685.1 nickel/cobalt efflux protein RcnA -
NMU34_RS04345 (892192) 892192..892464 + 273 WP_000019953.1 Ni(II)/Co(II)-binding transcriptional repressor RcnR -
NMU34_RS04350 (892495) 892495..893724 - 1230 WP_000036825.1 amino acid permease -
NMU34_RS04355 (893866) 893866..894321 - 456 WP_001519547.1 multidrug/biocide efflux PACE transporter -
NMU34_RS04360 (894425) 894425..895288 + 864 WP_001270766.1 LysR family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Genomic island TA439 NC_003197 3186004..3197296 0.004
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 Genomic island TA25956 NC_016810 3207430..3218010 0.002
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Genomic island TA26056 NC_016856 3205849..3216429 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Genomic island TA297244 UFRD01000002 4451871..4463194 0