MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP101375 Location: 885966..894617 Organism: Salmonella enterica strain SC2016090 Replicon: chromosome
Accession: NZ_CP101375 Location: 885966..894617 Organism: Salmonella enterica strain SC2016090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU33_RS04260 (881771) | 881771..882874 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| NMU33_RS04265 (882957) | 882957..883091 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| NMU33_RS04270 (883069) | 883069..883452 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| NMU33_RS04275 (883874) | 883874..884983 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| NMU33_RS04280 (885043) | 885043..885969 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| NMU33_RS04285 (885966) | 885966..887243 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| NMU33_RS04290 (887240) | 887240..888007 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| NMU33_RS04295 (888009) | 888009..888722 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| NMU33_RS04300 (888854) | 888854..889075 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NMU33_RS04305 (889072) | 889072..889440 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NMU33_RS04310 (889699) | 889699..891015 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| NMU33_RS04315 (891079) | 891079..891966 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| NMU33_RS04320 (891963) | 891963..892808 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| NMU33_RS04325 (892810) | 892810..893880 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| NMU33_RS04330 (893877) | 893877..894617 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| NMU33_RS04335 (894630) | 894630..895046 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| NMU33_RS04340 (895172) | 895172..896914 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| NMU33_RS04345 (896959) | 896959..897993 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| NMU33_RS04350 (897990) | 897990..898961 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |