MGE detailed information
MGE type: Prophage MGE length: 38317 bp
Accession: NZ_CP101373 Location: 2155588..2193904 Organism: Salmonella enterica strain SC2016042 Replicon: chromosome
Accession: NZ_CP101373 Location: 2155588..2193904 Organism: Salmonella enterica strain SC2016042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU32_RS10575 () | 2151861..2152502 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NMU32_RS10580 () | 2152602..2153780 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NMU32_RS10585 () | 2153911..2154201 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NMU32_RS10590 () | 2154269..2154622 | + | 354 | WP_001042119.1 | protein YebF | - |
| NMU32_RS10595 () | 2154716..2155375 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NMU32_RS10600 () | 2155588..2157639 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NMU32_RS10605 () | 2157674..2158372 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NMU32_RS10610 () | 2158396..2159052 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NMU32_RS10615 () | 2159160..2159390 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NMU32_RS10620 () | 2159528..2159902 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NMU32_RS10625 () | 2159903..2160778 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NMU32_RS10630 () | 2160795..2161148 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2161248..2161393 | - | 146 | - | - | Antitoxin Detail |
| - | 2161288..2161391 | + | 104 | - | - | Toxin Detail |
| NMU32_RS10635 () | 2161522..2162445 | - | 924 | Protein_2081 | hypothetical protein ; Integrase | Integrase |
| NMU32_RS10640 () | 2162709..2163170 | - | 462 | Protein_2082 | DNA breaking-rejoining protein | - |
| NMU32_RS10645 () | 2163159..2163350 | + | 192 | Protein_2083 | glycoside hydrolase family 19 protein | - |
| NMU32_RS10650 () | 2163404..2163937 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NMU32_RS10655 () | 2164194..2164361 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NMU32_RS10660 () | 2164426..2164614 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NMU32_RS10665 () | 2164669..2164929 | + | 261 | Protein_2087 | DUF1441 family protein | - |
| NMU32_RS10670 () | 2165144..2165488 | + | 345 | Protein_2088 | macro domain-containing protein | - |
| NMU32_RS10675 () | 2165498..2165968 | + | 471 | Protein_2089 | tail fiber assembly protein | - |
| NMU32_RS10680 () | 2166065..2166292 | - | 228 | WP_010989049.1 | PagK family vesicle-borne virulence factor | - |
| NMU32_RS10685 () | 2166655..2166835 | - | 181 | Protein_2091 | IS3 family transposase | - |
| NMU32_RS10690 () | 2166835..2166960 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| NMU32_RS10695 () | 2167549..2167781 | + | 233 | Protein_2093 | helix-turn-helix domain-containing protein | - |
| NMU32_RS10700 () | 2168108..2168722 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NMU32_RS10705 () | 2168732..2168890 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NMU32_RS10710 () | 2169023..2169937 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NMU32_RS10715 () | 2171250..2171672 | - | 423 | Protein_2097 | hypothetical protein ; Integrase | Integrase |
| NMU32_RS10720 () | 2171742..2172936 | + | 1195 | Protein_2098 | IS256 family transposase IS285 | Transposase |
| NMU32_RS10725 () | 2173082..2173222 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NMU32_RS10730 () | 2173388..2173657 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NMU32_RS10735 () | 2174027..2174446 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NMU32_RS10740 () | 2174834..2175310 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NMU32_RS10745 () | 2175640..2176035 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NMU32_RS10750 () | 2176718..2177440 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NMU32_RS10755 () | 2177725..2177889 | + | 165 | WP_001134856.1 | membrane protein | - |
| NMU32_RS10760 () | 2178113..2178763 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NMU32_RS10765 () | 2178782..2178973 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NMU32_RS10770 () | 2179084..2179320 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NMU32_RS10775 () | 2179438..2180877 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NMU32_RS10780 () | 2180955..2183588 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NMU32_RS10785 () | 2183557..2184840 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NMU32_RS10790 () | 2184969..2185466 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NMU32_RS10795 () | 2185564..2186250 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NMU32_RS10800 () | 2186270..2188318 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| NMU32_RS10805 () | 2188511..2189392 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NMU32_RS10810 () | 2189440..2190813 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NMU32_RS10815 () | 2190989..2191780 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NMU32_RS10820 () | 2191992..2192231 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NMU32_RS10825 () | 2192389..2192532 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NMU32_RS10830 () | 2192603..2192890 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NMU32_RS10835 () | 2193539..2193682 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NMU32_RS10840 () | 2193695..2193904 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NMU32_RS10845 () | 2194124..2195869 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NMU32_RS10850 () | 2195935..2196744 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NMU32_RS10855 () | 2196741..2197307 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NMU32_RS10860 () | 2197717..2198175 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |