MGE detailed information
MGE type: Prophage MGE length: 38318 bp
Accession: NZ_CP101372 Location: 2446527..2484844 Organism: Salmonella enterica strain SC2016025 Replicon: chromosome
Accession: NZ_CP101372 Location: 2446527..2484844 Organism: Salmonella enterica strain SC2016025 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU31_RS12120 () | 2442800..2443441 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NMU31_RS12125 () | 2443541..2444719 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NMU31_RS12130 () | 2444850..2445140 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NMU31_RS12135 () | 2445208..2445561 | + | 354 | WP_001042119.1 | protein YebF | - |
| NMU31_RS12140 () | 2445655..2446314 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NMU31_RS12145 () | 2446527..2448578 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NMU31_RS12150 () | 2448613..2449311 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NMU31_RS12155 () | 2449335..2449991 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NMU31_RS12160 () | 2450099..2450329 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NMU31_RS12165 () | 2450467..2450841 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NMU31_RS12170 () | 2450842..2451717 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NMU31_RS12175 () | 2451734..2452087 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2452187..2452332 | - | 146 | - | - | Antitoxin Detail |
| - | 2452227..2452330 | + | 104 | - | - | Toxin Detail |
| NMU31_RS12180 () | 2452461..2453384 | - | 924 | Protein_2390 | hypothetical protein ; Integrase | Integrase |
| NMU31_RS12185 () | 2453648..2454109 | - | 462 | Protein_2391 | DNA breaking-rejoining protein | - |
| NMU31_RS12190 () | 2454098..2454289 | + | 192 | Protein_2392 | glycoside hydrolase family 19 protein | - |
| NMU31_RS12195 () | 2454343..2454876 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NMU31_RS12200 () | 2455133..2455300 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NMU31_RS12205 () | 2455365..2455553 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NMU31_RS12210 () | 2455608..2455868 | + | 261 | Protein_2396 | DUF1441 family protein | - |
| NMU31_RS12215 () | 2456083..2456427 | + | 345 | Protein_2397 | macro domain-containing protein | - |
| NMU31_RS12220 () | 2456437..2456907 | + | 471 | Protein_2398 | tail fiber assembly protein | - |
| NMU31_RS12225 () | 2457004..2457231 | - | 228 | WP_010989049.1 | PagK family vesicle-borne virulence factor | - |
| NMU31_RS12230 () | 2457594..2457774 | - | 181 | Protein_2400 | IS3 family transposase | - |
| NMU31_RS12235 () | 2457774..2457899 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| NMU31_RS12240 () | 2458488..2458720 | + | 233 | Protein_2402 | helix-turn-helix domain-containing protein | - |
| NMU31_RS12245 () | 2459047..2459661 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NMU31_RS12250 () | 2459671..2459829 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NMU31_RS12255 () | 2459962..2460876 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NMU31_RS12260 () | 2462189..2462611 | - | 423 | Protein_2406 | hypothetical protein ; Integrase | Integrase |
| NMU31_RS12265 () | 2462681..2463875 | + | 1195 | Protein_2407 | IS256 family transposase IS285 | Transposase |
| NMU31_RS12270 () | 2464021..2464161 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NMU31_RS12275 () | 2464327..2464596 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NMU31_RS12280 () | 2464966..2465385 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NMU31_RS12285 () | 2465773..2466249 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NMU31_RS12290 () | 2466579..2466974 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NMU31_RS12295 () | 2467657..2468379 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NMU31_RS12300 () | 2468664..2468828 | + | 165 | WP_001134856.1 | membrane protein | - |
| NMU31_RS12305 () | 2469052..2469702 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NMU31_RS12310 () | 2469721..2469912 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NMU31_RS12315 () | 2470023..2470259 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NMU31_RS12320 () | 2470377..2471816 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NMU31_RS12325 () | 2471894..2474527 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NMU31_RS12330 () | 2474496..2475779 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NMU31_RS12335 () | 2475908..2476405 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NMU31_RS12340 () | 2476503..2477189 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NMU31_RS12345 () | 2477209..2479257 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| NMU31_RS12350 () | 2479451..2480332 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NMU31_RS12355 () | 2480380..2481753 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NMU31_RS12360 () | 2481929..2482720 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NMU31_RS12365 () | 2482932..2483171 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NMU31_RS12370 () | 2483329..2483472 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NMU31_RS12375 () | 2483543..2483830 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NMU31_RS12380 () | 2484479..2484622 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NMU31_RS12385 () | 2484635..2484844 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NMU31_RS12390 () | 2485064..2486809 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NMU31_RS12395 () | 2486875..2487684 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NMU31_RS12400 () | 2487681..2488247 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NMU31_RS12405 () | 2488657..2489115 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |