MGE detailed information
MGE type: Prophage MGE length: 38318 bp
Accession: NZ_CP100707 Location: 2086618..2124935 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: chromosome
Accession: NZ_CP100707 Location: 2086618..2124935 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL735_RS10240 () | 2082891..2083532 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL735_RS10245 () | 2083632..2084810 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL735_RS10250 () | 2084941..2085231 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NL735_RS10255 () | 2085299..2085652 | + | 354 | WP_001042119.1 | protein YebF | - |
| NL735_RS10260 () | 2085746..2086405 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NL735_RS10265 () | 2086618..2088669 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NL735_RS10270 () | 2088704..2089402 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NL735_RS10275 () | 2089426..2090082 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NL735_RS10280 () | 2090190..2090420 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NL735_RS10285 () | 2090558..2090932 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NL735_RS10290 () | 2090933..2091808 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NL735_RS10295 () | 2091825..2092178 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2092278..2092423 | - | 146 | - | - | Antitoxin Detail |
| - | 2092318..2092421 | + | 104 | - | - | Toxin Detail |
| NL735_RS10300 () | 2092552..2093475 | - | 924 | Protein_2015 | hypothetical protein ; Integrase | Integrase |
| NL735_RS10305 () | 2093739..2094200 | - | 462 | Protein_2016 | DNA breaking-rejoining protein | - |
| NL735_RS10310 () | 2094189..2094380 | + | 192 | Protein_2017 | glycoside hydrolase family 19 protein | - |
| NL735_RS10315 () | 2094434..2094967 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NL735_RS10320 () | 2095224..2095391 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NL735_RS10325 () | 2095456..2095644 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NL735_RS10330 () | 2095699..2095959 | + | 261 | Protein_2021 | DUF1441 family protein | - |
| NL735_RS10335 () | 2095961..2096176 | + | 216 | Protein_2022 | shikimate transporter | - |
| NL735_RS10340 () | 2096174..2096518 | + | 345 | Protein_2023 | macro domain-containing protein | - |
| NL735_RS10345 () | 2096528..2096998 | + | 471 | Protein_2024 | tail fiber assembly protein | - |
| NL735_RS10350 () | 2097095..2097295 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NL735_RS10355 () | 2097685..2097865 | - | 181 | Protein_2026 | IS3 family transposase | - |
| NL735_RS10360 () | 2097856..2097957 | + | 102 | Protein_2027 | arsenic transporter | - |
| NL735_RS10365 () | 2098579..2098811 | + | 233 | Protein_2028 | helix-turn-helix domain-containing protein | - |
| NL735_RS10370 () | 2099138..2099752 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NL735_RS10375 () | 2099762..2099920 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NL735_RS10380 () | 2100053..2100967 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NL735_RS10385 () | 2102280..2102702 | - | 423 | Protein_2032 | hypothetical protein ; Integrase | Integrase |
| NL735_RS10390 () | 2102772..2103966 | + | 1195 | Protein_2033 | IS256 family transposase IS285 | Transposase |
| NL735_RS10395 () | 2104112..2104252 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NL735_RS10400 () | 2104418..2104687 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NL735_RS10405 () | 2105057..2105476 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NL735_RS10410 () | 2105864..2106340 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NL735_RS10415 () | 2106670..2107065 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NL735_RS10420 () | 2107748..2108470 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NL735_RS10425 () | 2108755..2108919 | + | 165 | WP_001134856.1 | membrane protein | - |
| NL735_RS10430 () | 2109143..2109793 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NL735_RS10435 () | 2109812..2110003 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NL735_RS10440 () | 2110114..2110350 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NL735_RS10445 () | 2110468..2111907 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL735_RS10450 () | 2111985..2114618 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NL735_RS10455 () | 2114587..2115870 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NL735_RS10460 () | 2115999..2116496 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NL735_RS10465 () | 2116594..2117280 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NL735_RS10470 () | 2117300..2119348 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| NL735_RS10475 () | 2119542..2120423 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NL735_RS10480 () | 2120471..2121844 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NL735_RS10485 () | 2122020..2122811 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NL735_RS10490 () | 2123023..2123262 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NL735_RS10495 () | 2123420..2123563 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NL735_RS10500 () | 2123634..2123921 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NL735_RS10505 () | 2124570..2124713 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NL735_RS10510 () | 2124726..2124935 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NL735_RS10515 () | 2125155..2126900 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NL735_RS10520 () | 2126966..2127775 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NL735_RS10525 () | 2127772..2128338 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NL735_RS10530 () | 2128748..2129206 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |