MGE detailed information
MGE type: Prophage MGE length: 8651 bp
Accession: NZ_CP100691 Location: 398833..407483 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Accession: NZ_CP100691 Location: 398833..407483 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL690_RS01850 (394638) | 394638..395741 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| NL690_RS01855 (395824) | 395824..395958 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| NL690_RS01860 (395936) | 395936..396319 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| NL690_RS01865 (396741) | 396741..397850 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| NL690_RS01870 (397910) | 397910..398836 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| NL690_RS01875 (398833) | 398833..400110 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| NL690_RS01880 (400107) | 400107..400874 | + | 768 | WP_000082083.1 | hypothetical protein | VF |
| NL690_RS01885 (400876) | 400876..401589 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| NL690_RS01890 (401720) | 401720..401941 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL690_RS01895 (401938) | 401938..402306 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NL690_RS01900 (402565) | 402565..403881 | + | 1317 | WP_099949595.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| NL690_RS01905 (403945) | 403945..404832 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| NL690_RS01910 (404829) | 404829..405674 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| NL690_RS01915 (405676) | 405676..406746 | + | 1071 | WP_000907838.1 | hypothetical protein | VF |
| NL690_RS01920 (406743) | 406743..407483 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| NL690_RS01925 (407496) | 407496..407912 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| NL690_RS01930 (408038) | 408038..409780 | + | 1743 | WP_099949596.1 | gamma-glutamyltransferase | - |
| NL690_RS01935 (409825) | 409825..410859 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| NL690_RS01940 (410856) | 410856..411827 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |