MGE detailed information
MGE type: Prophage MGE length: 39648 bp
Accession: NZ_CP100691 Location: 2195289..2234936 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Accession: NZ_CP100691 Location: 2195289..2234936 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL690_RS10670 () | 2191562..2192203 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL690_RS10675 () | 2192303..2193481 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL690_RS10680 () | 2193612..2193902 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NL690_RS10685 () | 2193970..2194323 | + | 354 | WP_001042119.1 | protein YebF | - |
| NL690_RS10690 () | 2194417..2195076 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NL690_RS10695 () | 2195289..2197340 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NL690_RS10700 () | 2197375..2198073 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NL690_RS10705 () | 2198097..2198753 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NL690_RS10710 () | 2198861..2199091 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NL690_RS10715 () | 2199229..2199603 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NL690_RS10720 () | 2199604..2200479 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NL690_RS10725 () | 2200496..2200849 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2200949..2201094 | - | 146 | - | - | Antitoxin Detail |
| - | 2200989..2201092 | + | 104 | - | - | Toxin Detail |
| NL690_RS10730 () | 2201223..2202146 | - | 924 | Protein_2100 | hypothetical protein ; Integrase | Integrase |
| NL690_RS10735 () | 2202410..2202871 | - | 462 | Protein_2101 | DNA breaking-rejoining protein | - |
| NL690_RS10740 () | 2202860..2203051 | + | 192 | Protein_2102 | glycoside hydrolase family 19 protein | - |
| NL690_RS10745 () | 2203105..2203638 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NL690_RS10750 () | 2203895..2204062 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NL690_RS10755 () | 2204127..2204315 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NL690_RS10760 () | 2204370..2204630 | + | 261 | Protein_2106 | DUF1441 family protein | - |
| NL690_RS10765 () | 2204845..2205189 | + | 345 | Protein_2107 | macro domain-containing protein | - |
| NL690_RS10770 () | 2205199..2205669 | + | 471 | Protein_2108 | tail fiber assembly protein | - |
| NL690_RS10775 () | 2205766..2205966 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NL690_RS10780 () | 2206356..2206536 | - | 181 | Protein_2110 | IS3 family transposase | - |
| NL690_RS10785 () | 2206527..2206628 | + | 102 | Protein_2111 | arsenic transporter | - |
| NL690_RS10790 () | 2207250..2207482 | + | 233 | Protein_2112 | helix-turn-helix domain-containing protein | - |
| NL690_RS10795 () | 2207809..2208423 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NL690_RS10800 () | 2208433..2208591 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NL690_RS10805 () | 2208724..2209638 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NL690_RS10810 () | 2210942..2211364 | - | 423 | Protein_2116 | hypothetical protein ; Integrase | Integrase |
| NL690_RS10815 () | 2211434..2212628 | + | 1195 | Protein_2117 | IS256 family transposase IS285 | Transposase |
| NL690_RS10820 () | 2212774..2212914 | - | 141 | WP_099949657.1 | hypothetical protein | - |
| NL690_RS10825 () | 2213169..2214377 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| NL690_RS10830 () | 2214418..2214687 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NL690_RS10835 () | 2215057..2215476 | + | 420 | WP_099949658.1 | GNAT family N-acetyltransferase | - |
| NL690_RS10840 () | 2215864..2216340 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NL690_RS10845 () | 2216670..2217065 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NL690_RS10850 () | 2217749..2218471 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| NL690_RS10855 () | 2218756..2218920 | + | 165 | WP_001134856.1 | membrane protein | - |
| NL690_RS10860 () | 2219144..2219794 | + | 651 | WP_099949659.1 | protein-serine/threonine phosphatase | - |
| NL690_RS10865 () | 2219813..2220004 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NL690_RS10870 () | 2220115..2220351 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NL690_RS10875 () | 2220469..2221908 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL690_RS10880 () | 2221986..2224619 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| NL690_RS10885 () | 2224588..2225871 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NL690_RS10890 () | 2226000..2226497 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NL690_RS10895 () | 2226595..2227281 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NL690_RS10900 () | 2227301..2229349 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| NL690_RS10905 () | 2229543..2230424 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NL690_RS10910 () | 2230472..2231845 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NL690_RS10915 () | 2232021..2232812 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NL690_RS10920 () | 2233024..2233263 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NL690_RS10925 () | 2233421..2233564 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NL690_RS10930 () | 2233635..2233922 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NL690_RS10935 () | 2234571..2234714 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NL690_RS10940 () | 2234727..2234936 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NL690_RS10945 () | 2235156..2236901 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NL690_RS10950 () | 2236967..2237776 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NL690_RS10955 () | 2237773..2238339 | - | 567 | WP_152031901.1 | manganese efflux pump MntP | - |
| NL690_RS10960 () | 2238749..2239207 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.001 |