MGE detailed information
MGE type: Conjugative plasmid MGE length: 112293 bp
Accession: NZ_CP100502 Location: 1..112293 Organism: Escherichia coli strain LH50-c Replicon: plasmid pLH50-c-B
Accession: NZ_CP100502 Location: 1..112293 Organism: Escherichia coli strain LH50-c Replicon: plasmid pLH50-c-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ13_RS27800 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| NLZ13_RS27805 (2100) | 2100..2900 | - | 801 | Protein_1 | IS91 family transposase ISSbo1 | Transposase |
| NLZ13_RS27810 (2999) | 2999..5965 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NLZ13_RS27815 (5969) | 5969..6529 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NLZ13_RS27820 (6705) | 6705..7055 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| NLZ13_RS27825 (7258) | 7258..8271 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NLZ13_RS27830 (8428) | 8428..8901 | + | 474 | WP_000777555.1 | hypothetical protein | ARG |
| NLZ13_RS27835 (8994) | 8994..9296 | + | 303 | Protein_7 | nucleotidyltransferase domain-containing protein | - |
| NLZ13_RS27840 (9445) | 9445..10305 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| NLZ13_RS27845 (10488) | 10488..11045 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NLZ13_RS27850 (11209) | 11209..14214 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NLZ13_RS27855 (14247) | 14247..14660 | - | 414 | Protein_11 | IS91 family transposase ISSbo1 | Transposase |
| NLZ13_RS27860 (14641) | 14641..14913 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| NLZ13_RS27865 (15128) | 15128..15943 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| NLZ13_RS27870 (16030) | 16030..16272 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| NLZ13_RS27875 (16508) | 16508..17653 | - | 1146 | Protein_15 | IS91 family transposase ISVsa3 | Transposase |
| NLZ13_RS27880 (18011) | 18011..18280 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NLZ13_RS27885 (18280) | 18280..18558 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NLZ13_RS27890 (18598) | 18598..19446 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| NLZ13_RS27895 (19587) | 19587..20036 | + | 450 | WP_001236003.1 | hypothetical protein | - |
| NLZ13_RS27900 (20513) | 20513..20779 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| NLZ13_RS27905 (20779) | 20779..21273 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| NLZ13_RS27910 (21329) | 21329..21931 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| NLZ13_RS27915 (22285) | 22285..23631 | + | 1347 | WP_001132032.1 | protein YagA | - |
| NLZ13_RS27920 (23910) | 23910..25790 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NLZ13_RS27925 (25808) | 25808..26155 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| NLZ13_RS27930 (26274) | 26274..26622 | + | 349 | Protein_26 | DUF6404 family protein | - |
| NLZ13_RS27935 (26642) | 26642..27232 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| NLZ13_RS27940 (27232) | 27232..27489 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| NLZ13_RS27945 (27840) | 27840..28841 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| NLZ13_RS27950 (29017) | 29017..29361 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| NLZ13_RS27955 (29860) | 29860..30114 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| NLZ13_RS27960 (30159) | 30159..31085 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| NLZ13_RS27965 (31617) | 31617..32030 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| NLZ13_RS27970 (32032) | 32032..32811 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| NLZ13_RS27975 (32991) | 32991..33635 | + | 645 | WP_001144036.1 | ParA family protein | - |
| NLZ13_RS27980 (33722) | 33722..34030 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| NLZ13_RS27985 (34444) | 34444..35424 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| NLZ13_RS27990 (35417) | 35417..35833 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| NLZ13_RS27995 (35835) | 35835..37109 | - | 1275 | WP_025653366.1 | Y-family DNA polymerase | - |
| NLZ13_RS28000 (37109) | 37109..37546 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NLZ13_RS28005 (37543) | 37543..37791 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NLZ13_RS28010 (38209) | 38209..39111 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| NLZ13_RS28015 (39108) | 39108..39419 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| NLZ13_RS28020 (39496) | 39496..40179 | + | 684 | WP_000086178.1 | DNA methylase | - |
| NLZ13_RS28025 (40180) | 40180..40401 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| NLZ13_RS28030 (40361) | 40361..40847 | + | 487 | Protein_46 | DUF1380 domain-containing protein | - |
| NLZ13_RS28035 (40898) | 40898..41668 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| NLZ13_RS28040 (42086) | 42086..42511 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| NLZ13_RS28045 (42558) | 42558..42980 | + | 423 | WP_254539440.1 | DUF1380 family protein | - |
| NLZ13_RS28050 (42977) | 42977..43168 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| NLZ13_RS28055 (43374) | 43374..43772 | - | 399 | WP_254539441.1 | hypothetical protein | - |
| NLZ13_RS28060 (43974) | 43974..44501 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| NLZ13_RS28065 (44559) | 44559..44792 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| NLZ13_RS28070 (44851) | 44851..46809 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| NLZ13_RS28075 (46864) | 46864..47298 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| NLZ13_RS28080 (47295) | 47295..48014 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| NLZ13_RS28085 (48011) | 48011..48607 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| NLZ13_RS28090 (49070) | 49070..49570 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| NLZ13_RS28095 (50299) | 50299..50733 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NLZ13_RS28100 (50825) | 50825..51091 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NLZ13_RS28105 (51156) | 51156..52097 | + | 942 | WP_000038339.1 | hypothetical protein | VF |
| NLZ13_RS28110 (52159) | 52159..52329 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| NLZ13_RS28115 (52360) | 52360..52611 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NLZ13_RS28120 (53191) | 53191..54039 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| NLZ13_RS28125 (54124) | 54124..54459 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| NLZ13_RS28130 (54693) | 54693..55025 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NLZ13_RS28135 (55036) | 55036..57735 | + | 2700 | WP_024143648.1 | hypothetical protein | Relaxase |
| NLZ13_RS28140 (57772) | 57772..60063 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| NLZ13_RS28145 (60056) | 60056..61126 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| NLZ13_RS28150 (61145) | 61145..62353 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (62533) | 62533..62590 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (62533) | 62533..62590 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (62533) | 62533..62590 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (62533) | 62533..62590 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| NLZ13_RS28155 (62645) | 62645..62797 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| NLZ13_RS28160 (62869) | 62869..63120 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NLZ13_RS28165 (63482) | 63482..63714 | + | 233 | Protein_73 | hypothetical protein | - |
| NLZ13_RS28170 (63779) | 63779..63955 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| NLZ13_RS28175 (64347) | 64347..64556 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NLZ13_RS28180 (64628) | 64628..65278 | - | 651 | WP_148374384.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NLZ13_RS28185 (65352) | 65352..67520 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| NLZ13_RS28190 (67617) | 67617..68201 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| NLZ13_RS28195 (68230) | 68230..69432 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NLZ13_RS28200 (69399) | 69399..70013 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| NLZ13_RS28205 (70013) | 70013..73057 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| NLZ13_RS28210 (73147) | 73147..73947 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NLZ13_RS28215 (73931) | 73931..74119 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NLZ13_RS28220 (74183) | 74183..74587 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| NLZ13_RS28225 (74638) | 74638..75165 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NLZ13_RS28230 (75165) | 75165..75869 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NLZ13_RS28235 (75869) | 75869..77158 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| NLZ13_RS28240 (77161) | 77161..78144 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| NLZ13_RS28245 (78155) | 78155..78847 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| NLZ13_RS28250 (78844) | 78844..79191 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NLZ13_RS28255 (79209) | 79209..82976 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| NLZ13_RS28260 (83065) | 83065..83616 | - | 552 | WP_000014583.1 | Cardiolipin synthase A | VF |
| NLZ13_RS28265 (83631) | 83631..83921 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NLZ13_RS28270 (83918) | 83918..85066 | - | 1149 | WP_001024972.1 | hypothetical protein | VF |
| NLZ13_RS28275 (85063) | 85063..85881 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| NLZ13_RS28280 (85878) | 85878..86336 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NLZ13_RS28285 (86731) | 86731..87315 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NLZ13_RS28290 (87375) | 87375..88577 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| NLZ13_RS28295 (88662) | 88662..88931 | - | 270 | Protein_99 | conjugal transfer protein TraE | - |
| NLZ13_RS28305 (90265) | 90265..90822 | - | 558 | Protein_101 | conjugal transfer protein TraE | - |
| NLZ13_RS28310 (90973) | 90973..92016 | - | 1044 | Protein_102 | tyrosine-type recombinase/integrase | - |
| NLZ13_RS28315 (92110) | 92110..92490 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS28320 (92487) | 92487..92834 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS28325 (92884) | 92884..94422 | + | 1539 | WP_000997962.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS28330 (94461) | 94461..94577 | - | 117 | Protein_106 | integrase | - |
| NLZ13_RS28335 (95236) | 95236..95484 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| NLZ13_RS28340 (95978) | 95978..97306 | - | 1329 | WP_001496394.1 | hypothetical protein | VF |
| NLZ13_RS28345 (97306) | 97306..97962 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| NLZ13_RS28350 (97947) | 97947..98507 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| NLZ13_RS28355 (98517) | 98517..99131 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| NLZ13_RS28360 (99149) | 99149..100246 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NLZ13_RS28365 (100259) | 100259..101812 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| NLZ13_RS28370 (101823) | 101823..102275 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| NLZ13_RS28375 (102262) | 102262..103557 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| NLZ13_RS28380 (103550) | 103550..105232 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NLZ13_RS28385 (105246) | 105246..105683 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| NLZ13_RS28390 (105683) | 105683..106750 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| NLZ13_RS28395 (107374) | 107374..107670 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| NLZ13_RS28400 (107846) | 107846..108100 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NLZ13_RS28405 (108262) | 108262..108813 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| NLZ13_RS28410 (108986) | 108986..109669 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| NLZ13_RS28415 (109923) | 109923..110456 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| NLZ13_RS28420 (110898) | 110898..111185 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NLZ13_RS28425 (111103) | 111103..111333 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.009 |