MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP099588 Location: 1098191..1130071 Organism: Escherichia coli strain EMG2 Replicon: chromosome
Accession: NZ_CP099588 Location: 1098191..1130071 Organism: Escherichia coli strain EMG2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHF38_RS05270 (1094375) | 1094375..1095643 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| NHF38_RS05275 (1095663) | 1095663..1096640 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| NHF38_RS05280 (1096976) | 1096976..1099228 | - | 2253 | Protein_1041 | alpha-amylase family glycosyl hydrolase | - |
| NHF38_RS05290 (1100614) | 1100614..1101987 | + | 1374 | Protein_1042 | DUF5507 domain-containing protein | - |
| NHF38_RS23285 (1102381) | 1102381..1102560 | + | 180 | WP_087676347.1 | DNA invertase | - |
| NHF38_RS05300 (1102715) | 1102715..1102834 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| NHF38_RS05305 (1102899) | 1102899..1107479 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| NHF38_RS05310 (1107843) | 1107843..1108172 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| NHF38_RS05315 (1108193) | 1108193..1108510 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NHF38_RS05320 (1108548) | 1108548..1108748 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| NHF38_RS05325 (1108757) | 1108757..1109239 | - | 483 | WP_001407480.1 | RadC family protein | - |
| NHF38_RS05330 (1109248) | 1109248..1109706 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| NHF38_RS05335 (1109809) | 1109809..1109993 | - | 185 | Protein_1051 | DUF905 family protein | - |
| NHF38_RS05340 (1110604) | 1110604..1112307 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| NHF38_RS05345 (1112449) | 1112449..1113458 | + | 1010 | Protein_1053 | arsenic transporter | - |
| NHF38_RS05350 (1113471) | 1113471..1113623 | + | 153 | Protein_1054 | arsenate reductase | - |
| NHF38_RS05355 (1114010) | 1114010..1114477 | - | 468 | WP_000702495.1 | protein YfjT | - |
| NHF38_RS05360 (1114501) | 1114501..1114944 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| NHF38_RS05365 (1114944) | 1114944..1115180 | - | 237 | WP_001144029.1 | protein YpjK | - |
| NHF38_RS05370 (1115221) | 1115221..1115922 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| NHF38_RS05375 (1116139) | 1116139..1116960 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| NHF38_RS05380 (1117052) | 1117052..1117915 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| NHF38_RS05385 (1118270) | 1118270..1118641 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| NHF38_RS05390 (1118634) | 1118634..1119707 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| NHF38_RS05395 (1119849) | 1119849..1120112 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| NHF38_RS05400 (1120472) | 1120472..1122088 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| NHF38_RS05405 (1122085) | 1122085..1124274 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| NHF38_RS05410 (1124452) | 1124452..1125078 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| NHF38_RS05415 (1125231) | 1125231..1126640 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| NHF38_RS05420 (1126769) | 1126769..1126981 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| NHF38_RS05425 (1127025) | 1127025..1127981 | + | 957 | WP_000510827.1 | protein YfjH | - |
| NHF38_RS05430 (1128225) | 1128225..1129466 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| NHF38_RS05440 (1130247) | 1130247..1130729 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| NHF38_RS05445 (1130900) | 1130900..1131337 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| NHF38_RS05450 (1131327) | 1131327..1131617 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| NHF38_RS05455 (1131679) | 1131679..1132020 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| NHF38_RS05460 (1132169) | 1132169..1133830 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| NHF38_RS05465 (1133916) | 1133916..1134794 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |