MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP098741 Location: 1261887..1262063 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Accession: NZ_CP098741 Location: 1261887..1262063 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCG87_RS06175 (1256950) | 1256950..1257600 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| NCG87_RS06180 (1258057) | 1258057..1258500 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| NCG87_RS06185 (1258931) | 1258931..1259380 | + | 450 | WP_000381610.1 | membrane protein | - |
| NCG87_RS06190 (1259365) | 1259365..1259712 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NCG87_RS06195 (1259985) | 1259985..1260311 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| NCG87_RS06200 (1260552) | 1260552..1260730 | + | 179 | Protein_1205 | IS3 family transposase | - |
| NCG87_RS06205 (1261000) | 1261000..1261290 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NCG87_RS06210 (1261287) | 1261287..1261814 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NCG87_RS06215 (1261887) | 1261887..1262092 | - | 206 | Protein_1208 | IS5 family transposase ISEcl3 | Transposase |
| NCG87_RS06220 (1262439) | 1262439..1263095 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NCG87_RS06225 (1263267) | 1263267..1263788 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| NCG87_RS06230 (1263947) | 1263947..1266514 | + | 2568 | WP_088365275.1 | DNA mismatch repair protein MutS | - |
| NCG87_RS06235 (1266570) | 1266570..1266950 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |