MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP098438 Location: 354197..362848 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Replicon: chromosome
Accession: NZ_CP098438 Location: 354197..362848 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9193_RS01600 (350002) | 350002..351105 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| M9193_RS01605 (351188) | 351188..351322 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| M9193_RS01610 (351300) | 351300..351683 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| M9193_RS01615 (352105) | 352105..353214 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| M9193_RS01620 (353274) | 353274..354200 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| M9193_RS01625 (354197) | 354197..355474 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| M9193_RS01630 (355471) | 355471..356238 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| M9193_RS01635 (356240) | 356240..356953 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| M9193_RS01640 (357085) | 357085..357306 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| M9193_RS01645 (357303) | 357303..357671 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| M9193_RS01650 (357930) | 357930..359246 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| M9193_RS01655 (359310) | 359310..360197 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| M9193_RS01660 (360194) | 360194..361039 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| M9193_RS01665 (361041) | 361041..362111 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| M9193_RS01670 (362108) | 362108..362848 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| M9193_RS01675 (362861) | 362861..363277 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| M9193_RS01680 (363403) | 363403..365145 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| M9193_RS01685 (365190) | 365190..366224 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| M9193_RS01690 (366221) | 366221..367192 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |