NZ_CP0978832211254..2239646

MGE detailed information

MGE type: Prophage        MGE length: 28393 bp
Accession: NZ_CP097883        Location: 2211254..2239646         Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NAG71_RS10620 (2207503) 2207503..2209929 - 2427 WP_000041675.1 DmsA/YnfE/YnfF family dimethyl sulfoxide reductase -
NAG71_RS10625 (2210128) 2210128..2210433 - 306 WP_001300836.1 DUF1161 domain-containing protein -
NAG71_RS10630 (2210541) 2210541..2211251 + 711 WP_001321287.1 YnfC family lipoprotein -
NAG71_RS10635 (2211254) 2211254..2211814 - 561 WP_001138581.1 spermidine N1-acetyltransferase -
NAG71_RS10640 (2211849) 2211849..2212190 - 342 WP_000705211.1 DUF1283 family protein -
NAG71_RS10645 (2212325) 2212325..2212651 + 327 WP_000598292.1 YnfA family protein -
NAG71_RS10650 (2212857) 2212857..2214071 + 1215 WP_001295394.1 starvation-sensing protein RspA -
NAG71_RS10655 (2214083) 2214083..2215102 + 1020 WP_000836066.1 Zn-dependent oxidoreductase -
NAG71_RS10660 (2215290) 2215290..2216447 - 1158 Protein_2080 Putative defective protein IntQ ; Integrase Integrase
NAG71_RS10665 (2216461) 2216461..2217156 - 696 Protein_2081 IS3 family transposase IS2 Transposase
NAG71_RS10670 (2217153) 2217153..2217920 - 768 Protein_2082 exonuclease -
NAG71_RS10675 (2218013) 2218013..2218204 - 192 WP_001083297.1 lysis protein YdfD -
NAG71_RS10680 (2218201) 2218201..2218389 - 189 WP_000854559.1 cell division inhibition protein DicB -
NAG71_RS10685 (2218957) 2218957..2219175 - 219 WP_001171942.1 protein YdfC -
NAG71_RS10690 (2219205) 2219205..2219333 - 129 WP_000344964.1 protein YdfB -
NAG71_RS10695 (2219335) 2219335..2219490 - 156 WP_000379575.1 DUF1391 family protein -
NAG71_RS10700 (2219657) 2219657..2220064 - 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
NAG71_RS10705 (2220148) 2220148..2220378 + 231 WP_000920568.1 dicB transcriptional regulator DicC -
NAG71_RS10710 (2220362) 2220362..2220640 + 279 Protein_2090 hypothetical protein -
NAG71_RS10715 (2220675) 2220675..2220824 + 150 WP_011443592.1 protein YdfW -
NAG71_RS10720 (2221261) 2221261..2221593 - 333 WP_001301033.1 FlxA-like family protein -
NAG71_RS10725 (2221796) 2221796..2222101 - 306 WP_001326990.1 protein YdfV -
NAG71_RS10730 (2222126) 2222126..2222365 + 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
NAG71_RS10735 (2222365) 2222365..2222652 + 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
NAG71_RS10740 (2222724) 2222724..2222879 + 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
NAG71_RS10745 (2223096) 2223096..2223347 + 252 WP_000980994.1 protein Rem -
NAG71_RS10750 (2223414) 2223414..2223692 + 279 WP_012304870.1 hypothetical protein -
NAG71_RS10755 (2223694) 2223694..2224743 + 1050 WP_001393597.1 DUF968 domain-containing protein -
NAG71_RS10760 (2224757) 2224757..2225509 + 753 WP_001047135.1 antitermination protein -
NAG71_RS10765 (2225787) 2225787..2225876 - 90 WP_120795389.1 hypothetical protein -
NAG71_RS10770 (2225931) 2225931..2226143 - 213 WP_000087756.1 cold shock-like protein CspF -
NAG71_RS10775 (2226444) 2226444..2226659 + 216 WP_000066484.1 cold shock-like protein CspB -
NAG71_RS10780 (2227023) 2227023..2227193 - 171 WP_211180497.1 putative zinc-binding protein YnfU -
NAG71_RS10785 (2227413) 2227413..2227628 + 216 WP_000839590.1 phage lysis protein EssD -
NAG71_RS10790 (2227633) 2227633..2227944 + 312 WP_000189916.1 YdfR family protein -
NAG71_RS10795 (2227941) 2227941..2228474 + 534 WP_001092971.1 lysozyme -
NAG71_RS10800 (2228471) 2228471..2228968 + 498 WP_001071769.1 DUF2514 domain-containing protein -
NAG71_RS10805 (2229331) 2229331..2229543 + 213 WP_000066495.1 cold shock protein CspI -
NAG71_RS10810 (2229554) 2229554..2229742 + 189 WP_071524604.1 cold-shock protein -
NAG71_RS10815 (2229745) 2229745..2229810 + 66 WP_120795388.1 small protein YnfR -
NAG71_RS10820 (2229889) 2229889..2230044 + 156 WP_001309517.1 protein YnfN -
NAG71_RS10825 (2230216) 2230216..2230389 + 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
NAG71_RS10830 (2230541) 2230541..2230951 - 411 WP_000373090.1 DUF1398 domain-containing protein -
NAG71_RS10835 (2231009) 2231009..2231242 - 234 WP_001368374.1 YlcI/YnfO family protein -
NAG71_RS10840 (2231631) 2231631..2232200 + 570 WP_064673984.1 DNA-packaging protein -
NAG71_RS10845 (2232151) 2232151..2233113 + 963 WP_001027733.1 phage tail protein -
NAG71_RS10850 (2233113) 2233113..2233688 + 576 WP_001698950.1 tail fiber assembly protein -
NAG71_RS10855 (2233786) 2233786..2234376 - 591 WP_000078177.1 Tn3 family transposase TnpR_ISSba14 Transposase
NAG71_RS10860 (2234693) 2234693..2234926 - 234 WP_000836770.1 cold shock protein YdfK -
NAG71_RS10865 (2234995) 2234995..2235108 - 114 WP_120795384.1 YnaM/YnfT family protein -
NAG71_RS10870 (2235629) 2235629..2236996 + 1368 Protein_2122 MHS family MFS transporter -
NAG71_RS10875 (2237085) 2237085..2238545 + 1461 WP_000527743.1 mannitol dehydrogenase family protein -
NAG71_RS10880 (2238580) 2238580..2238783 - 204 WP_000214712.1 putative selenium delivery protein YdfZ -
NAG71_RS10885 (2238960) 2238960..2239646 - 687 WP_000215549.1 DNA-binding transcriptional regulator rspR -
NAG71_RS10890 (2239735) 2239735..2240481 - 747 WP_000636571.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -
NAG71_RS10895 (2240618) 2240618..2242663 + 2046 WP_000210373.1 peptidyl-dipeptidase Dcp -
NAG71_RS10900 (2242707) 2242707..2243225 - 519 WP_001024746.1 2-oxo-tetronate isomerase -
NAG71_RS10905 (2243501) 2243501..2243893 + 393 WP_000671737.1 YdeI family stress tolerance OB fold protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20026 CP009789 1611431..1634475 0.009
Escherichia coli str. K-12 substr. MC4100 Prophage TA20067 HG738867 1519531..1552992 0.01
Escherichia coli str. K-12 substr. MG1655 Prophage TA1041 NC_000913 1631002..1664463 0.01
Escherichia coli str. K-12 substr. W3110 Prophage TA21438 NC_007779 1632716..1654422 0.007
Escherichia coli BW2952 Prophage TA23854 NC_012759 1521085..1554546 0.01
Escherichia coli BW25113 Prophage TA48683 NZ_CP009273 1625259..1658720 0.01
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Prophage TA68425 NZ_CP017979 1534772..1559021 0.006
Escherichia coli strain DH5alpha Prophage TA90479 NZ_CP025520 488442..510148 0.007
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285017 NZ_HG738867 1519531..1552992 0.01