MGE detailed information
MGE type: Prophage MGE length: 28393 bp
Accession: NZ_CP097882 Location: 2211254..2239646 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP097882 Location: 2211254..2239646 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NAG70_RS10620 (2207503) | 2207503..2209929 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NAG70_RS10625 (2210128) | 2210128..2210433 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| NAG70_RS10630 (2210541) | 2210541..2211251 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| NAG70_RS10635 (2211254) | 2211254..2211814 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| NAG70_RS10640 (2211849) | 2211849..2212190 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| NAG70_RS10645 (2212325) | 2212325..2212651 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| NAG70_RS10650 (2212857) | 2212857..2214071 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| NAG70_RS10655 (2214083) | 2214083..2215102 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| NAG70_RS10660 (2215290) | 2215290..2216447 | - | 1158 | Protein_2080 | Putative defective protein IntQ ; Integrase | Integrase |
| NAG70_RS10665 (2216461) | 2216461..2217156 | - | 696 | Protein_2081 | IS3 family transposase IS2 | Transposase |
| NAG70_RS10670 (2217153) | 2217153..2217920 | - | 768 | Protein_2082 | exonuclease | - |
| NAG70_RS10675 (2218013) | 2218013..2218204 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| NAG70_RS10680 (2218201) | 2218201..2218389 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NAG70_RS10685 (2218957) | 2218957..2219175 | - | 219 | WP_001171942.1 | protein YdfC | - |
| NAG70_RS10690 (2219205) | 2219205..2219333 | - | 129 | WP_000344964.1 | protein YdfB | - |
| NAG70_RS10695 (2219335) | 2219335..2219490 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| NAG70_RS10700 (2219657) | 2219657..2220064 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| NAG70_RS10705 (2220148) | 2220148..2220378 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| NAG70_RS10710 (2220362) | 2220362..2220640 | + | 279 | Protein_2090 | hypothetical protein | - |
| NAG70_RS10715 (2220675) | 2220675..2220824 | + | 150 | WP_011443592.1 | protein YdfW | - |
| NAG70_RS10720 (2221261) | 2221261..2221593 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| NAG70_RS10725 (2221796) | 2221796..2222101 | - | 306 | WP_001326990.1 | protein YdfV | - |
| NAG70_RS10730 (2222126) | 2222126..2222365 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NAG70_RS10735 (2222365) | 2222365..2222652 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NAG70_RS10740 (2222724) | 2222724..2222879 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NAG70_RS10745 (2223096) | 2223096..2223347 | + | 252 | WP_000980994.1 | protein Rem | - |
| NAG70_RS10750 (2223414) | 2223414..2223692 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| NAG70_RS10755 (2223694) | 2223694..2224743 | + | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| NAG70_RS10760 (2224757) | 2224757..2225509 | + | 753 | WP_001047135.1 | antitermination protein | - |
| NAG70_RS10765 (2225787) | 2225787..2225876 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| NAG70_RS10770 (2225931) | 2225931..2226143 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NAG70_RS10775 (2226444) | 2226444..2226659 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NAG70_RS10780 (2227023) | 2227023..2227193 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NAG70_RS10785 (2227413) | 2227413..2227628 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| NAG70_RS10790 (2227633) | 2227633..2227944 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| NAG70_RS10795 (2227941) | 2227941..2228474 | + | 534 | WP_001092971.1 | lysozyme | - |
| NAG70_RS10800 (2228471) | 2228471..2228968 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| NAG70_RS10805 (2229331) | 2229331..2229543 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NAG70_RS10810 (2229554) | 2229554..2229742 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| NAG70_RS10815 (2229745) | 2229745..2229810 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| NAG70_RS10820 (2229889) | 2229889..2230044 | + | 156 | WP_001309517.1 | protein YnfN | - |
| NAG70_RS10825 (2230216) | 2230216..2230389 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NAG70_RS10830 (2230541) | 2230541..2230951 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| NAG70_RS10835 (2231009) | 2231009..2231242 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| NAG70_RS10840 (2231631) | 2231631..2232200 | + | 570 | WP_064673984.1 | DNA-packaging protein | - |
| NAG70_RS10845 (2232151) | 2232151..2233113 | + | 963 | WP_001027733.1 | phage tail protein | - |
| NAG70_RS10850 (2233113) | 2233113..2233688 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| NAG70_RS10855 (2233786) | 2233786..2234376 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NAG70_RS10860 (2234693) | 2234693..2234926 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| NAG70_RS10865 (2234995) | 2234995..2235108 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NAG70_RS10870 (2235629) | 2235629..2236996 | + | 1368 | Protein_2122 | MHS family MFS transporter | - |
| NAG70_RS10875 (2237085) | 2237085..2238545 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| NAG70_RS10880 (2238580) | 2238580..2238783 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NAG70_RS10885 (2238960) | 2238960..2239646 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| NAG70_RS10890 (2239735) | 2239735..2240481 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| NAG70_RS10895 (2240618) | 2240618..2242663 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| NAG70_RS10900 (2242707) | 2242707..2243225 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| NAG70_RS10905 (2243501) | 2243501..2243893 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.01 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.007 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.01 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.006 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.01 |