MGE detailed information
MGE type: Conjugative plasmid MGE length: 96934 bp
Accession: NZ_CP097172 Location: 1..96934 Organism: Escherichia coli strain AR13438 Replicon: plasmid pAR13438_2
Accession: NZ_CP097172 Location: 1..96934 Organism: Escherichia coli strain AR13438 Replicon: plasmid pAR13438_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3M51_RS24590 (46) | 46..1077 | + | 1032 | WP_000907874.1 | plasmid replication initiator RepA | - |
| M3M51_RS24595 (1773) | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| M3M51_RS24600 (1986) | 1986..2255 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| M3M51_RS24605 (2255) | 2255..2533 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| M3M51_RS24610 (2573) | 2573..3421 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| M3M51_RS24615 (3538) | 3538..4011 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| M3M51_RS24620 (4488) | 4488..4754 | - | 267 | Protein_6 | hypothetical protein | - |
| M3M51_RS24625 (4754) | 4754..5248 | - | 495 | WP_023278058.1 | hypothetical protein | - |
| M3M51_RS24630 (5304) | 5304..5792 | - | 489 | Protein_8 | ProQ/FINO family protein | - |
| M3M51_RS24635 (5964) | 5964..7163 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| M3M51_RS24640 (7173) | 7173..7361 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| M3M51_RS24645 (7758) | 7758..8894 | + | 1137 | WP_256875600.1 | Beta-lactamase | ARG |
| M3M51_RS24650 (8988) | 8988..9521 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| M3M51_RS24655 (9518) | 9518..9835 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| M3M51_RS24660 (10563) | 10563..11798 | + | 1236 | WP_228745765.1 | colicin Ia central receptor-binding domain-containing protein | - |
| M3M51_RS24665 (11815) | 11815..12150 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| M3M51_RS24670 (12279) | 12279..12626 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| M3M51_RS24675 (12644) | 12644..13234 | - | 591 | WP_000194573.1 | hypothetical protein | - |
| M3M51_RS24680 (13234) | 13234..13491 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| M3M51_RS24685 (14062) | 14062..14412 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| M3M51_RS24690 (14456) | 14456..15145 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| M3M51_RS24695 (15142) | 15142..15930 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| M3M51_RS24700 (16110) | 16110..16754 | + | 645 | WP_001144036.1 | ParA family protein | - |
| M3M51_RS24705 (16841) | 16841..17149 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| M3M51_RS24710 (17563) | 17563..18543 | + | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| M3M51_RS24715 (18536) | 18536..18952 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| M3M51_RS24720 (18954) | 18954..20228 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| M3M51_RS24725 (20228) | 20228..20665 | - | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M3M51_RS24730 (20662) | 20662..20910 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| M3M51_RS24735 (21328) | 21328..22230 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| M3M51_RS24740 (22227) | 22227..22538 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| M3M51_RS24745 (22614) | 22614..23297 | + | 684 | WP_000086121.1 | DNA methylase | - |
| M3M51_RS24750 (23298) | 23298..23519 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| M3M51_RS24755 (23449) | 23449..23967 | + | 519 | WP_225089741.1 | DUF1380 family protein | - |
| M3M51_RS24760 (24018) | 24018..24794 | + | 777 | WP_024135924.1 | hypothetical protein | - |
| M3M51_RS24765 (25212) | 25212..25637 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| M3M51_RS24770 (25684) | 25684..26106 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| M3M51_RS24775 (26103) | 26103..26294 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| M3M51_RS24780 (26573) | 26573..28240 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| M3M51_RS24785 (28971) | 28971..29039 | - | 69 | Protein_39 | pilus protein | - |
| M3M51_RS24790 (29408) | 29408..29935 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| M3M51_RS24795 (29993) | 29993..30226 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| M3M51_RS24800 (30285) | 30285..32243 | + | 1959 | WP_001145462.1 | ParB/RepB/Spo0J family partition protein | - |
| M3M51_RS24805 (32298) | 32298..32732 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| M3M51_RS24810 (32729) | 32729..33448 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| M3M51_RS24815 (33445) | 33445..34041 | + | 597 | WP_272733545.1 | hypothetical protein | - |
| M3M51_RS24820 (34504) | 34504..35004 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| M3M51_RS24825 (35733) | 35733..36167 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| M3M51_RS24830 (36260) | 36260..36526 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| M3M51_RS24835 (36591) | 36591..37481 | + | 891 | WP_000038332.1 | ISNCY family transposase ISSen7 | VF |
| M3M51_RS24840 (37481) | 37481..37726 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| M3M51_RS24845 (37757) | 37757..38008 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| M3M51_RS24850 (38589) | 38589..39437 | + | 849 | WP_001077021.1 | DUF4942 domain-containing protein | - |
| M3M51_RS24855 (39523) | 39523..39858 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M3M51_RS24860 (40092) | 40092..40424 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| M3M51_RS24865 (40435) | 40435..43134 | + | 2700 | WP_010891268.1 | hypothetical protein | Relaxase |
| M3M51_RS24870 (43171) | 43171..45462 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| M3M51_RS24875 (45455) | 45455..46525 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| M3M51_RS24880 (46544) | 46544..47752 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (47932) | 47932..47994 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (47932) | 47932..47994 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (47932) | 47932..47994 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (47932) | 47932..47994 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| M3M51_RS24885 (48044) | 48044..48196 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| M3M51_RS24890 (48268) | 48268..48519 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| M3M51_RS24895 (49018) | 49018..49113 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| M3M51_RS24900 (49178) | 49178..49354 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| M3M51_RS24905 (49746) | 49746..49955 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| M3M51_RS24910 (50027) | 50027..50677 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M3M51_RS24915 (50751) | 50751..52919 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| M3M51_RS24920 (53016) | 53016..53600 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| M3M51_RS24925 (53629) | 53629..54831 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| M3M51_RS24930 (54798) | 54798..55412 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| M3M51_RS24935 (55412) | 55412..58456 | - | 3045 | WP_272733543.1 | IncI1-type conjugal transfer protein TraU | - |
| M3M51_RS24940 (58546) | 58546..59346 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M3M51_RS24945 (59330) | 59330..59518 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M3M51_RS24950 (59582) | 59582..59986 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| M3M51_RS24955 (60037) | 60037..60564 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M3M51_RS24960 (60564) | 60564..61268 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| M3M51_RS24965 (61268) | 61268..62557 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| M3M51_RS24970 (62560) | 62560..63543 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| M3M51_RS24975 (63554) | 63554..64246 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| M3M51_RS24980 (64243) | 64243..64590 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M3M51_RS24985 (64608) | 64608..68375 | - | 3768 | WP_272733544.1 | DUF5710 domain-containing protein | - |
| M3M51_RS24990 (68465) | 68465..69016 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| M3M51_RS24995 (69031) | 69031..69321 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| M3M51_RS25000 (69318) | 69318..70466 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| M3M51_RS25005 (70463) | 70463..71281 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| M3M51_RS25010 (71278) | 71278..71736 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| M3M51_RS25015 (72131) | 72131..72706 | - | 576 | WP_272733546.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| M3M51_RS25020 (72921) | 72921..73925 | - | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| M3M51_RS25025 (74102) | 74102..75304 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| M3M51_RS25030 (75389) | 75389..76213 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| M3M51_RS25035 (76364) | 76364..77518 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| M3M51_RS25040 (77517) | 77517..77834 | + | 318 | WP_001558195.1 | hypothetical protein | - |
| M3M51_RS25045 (79039) | 79039..79287 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| M3M51_RS25050 (79284) | 79284..80576 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| M3M51_RS25055 (80576) | 80576..81232 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| M3M51_RS25060 (81217) | 81217..81777 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| M3M51_RS25065 (81787) | 81787..82401 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| M3M51_RS25070 (82419) | 82419..83516 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| M3M51_RS25075 (83529) | 83529..85082 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| M3M51_RS25080 (85093) | 85093..85545 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| M3M51_RS25085 (85532) | 85532..86827 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| M3M51_RS25090 (86820) | 86820..88502 | - | 1683 | WP_032311054.1 | hypothetical protein | VF |
| M3M51_RS25095 (88516) | 88516..88953 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| M3M51_RS25100 (88953) | 88953..90020 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| M3M51_RS25110 (92030) | 92030..92482 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| M3M51_RS25115 (92525) | 92525..92779 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| M3M51_RS25120 (93047) | 93047..93613 | - | 567 | WP_000776428.1 | protein TraD | - |
| M3M51_RS25125 (93627) | 93627..94310 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| M3M51_RS25130 (94564) | 94564..95097 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| M3M51_RS25135 (95539) | 95539..95826 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| M3M51_RS25140 (95744) | 95744..95974 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.005 |