MGE detailed information
MGE type: Conjugative plasmid MGE length: 103920 bp
Accession: NZ_CP096835 Location: 1..103920 Organism: Escherichia coli strain PM4-5 Replicon: plasmid pPM4-5-103k
Accession: NZ_CP096835 Location: 1..103920 Organism: Escherichia coli strain PM4-5 Replicon: plasmid pPM4-5-103k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYF75_RS24900 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| MYF75_RS24905 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| MYF75_RS24910 (2124) | 2124..2258 | - | 135 | Protein_2 | serine/threonine protein kinase | - |
| MYF75_RS24915 (2760) | 2760..4259 | - | 1500 | WP_063073405.1 | alpha/beta hydrolase | - |
| MYF75_RS24920 (4352) | 4352..5302 | - | 951 | WP_149546669.1 | Outer membrane protease OmpP | VF |
| MYF75_RS24930 (7287) | 7287..11474 | + | 4188 | WP_223384816.1 | Outer membrane protein IcsA autotransporter | VF |
| MYF75_RS24935 (11576) | 11576..12556 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| MYF75_RS24940 (12822) | 12822..13139 | - | 318 | Protein_8 | IS3 family transposase ISKpn37 | Transposase |
| MYF75_RS24945 (13125) | 13125..13289 | + | 165 | WP_225390958.1 | hypothetical protein | - |
| MYF75_RS24950 (13445) | 13445..13945 | + | 501 | Protein_10 | IS21 family transposase IS100kyp | Transposase |
| MYF75_RS24955 (13942) | 13942..14637 | + | 696 | WP_074440817.1 | IS21 family transposase IS100kyp | Transposase |
| MYF75_RS24960 (14856) | 14856..15662 | - | 807 | WP_020219156.1 | site-specific integrase | - |
| MYF75_RS24965 (15663) | 15663..15968 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MYF75_RS24970 (15970) | 15970..16188 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MYF75_RS24975 (17004) | 17004..17294 | - | 291 | WP_032248853.1 | hypothetical protein | - |
| MYF75_RS24980 (17593) | 17593..18755 | - | 1163 | Protein_16 | IS3 family transposase | - |
| MYF75_RS24985 (18953) | 18953..23029 | + | 4077 | WP_241095186.1 | Serine protease SepA autotransporter | VF |
| MYF75_RS24990 (23207) | 23207..23896 | - | 690 | Protein_18 | IS3 family transposase | - |
| MYF75_RS24995 (23931) | 23931..24665 | - | 735 | Protein_19 | IS66 family transposase ISEc8 | Transposase |
| MYF75_RS25000 (24729) | 24729..25891 | + | 1163 | WP_099145072.1 | IS3 family transposase ISEc17 | Transposase |
| MYF75_RS25010 (26990) | 26990..27247 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| MYF75_RS25015 (27316) | 27316..29013 | - | 1698 | WP_000401034.1 | sulfatase | - |
| MYF75_RS25020 (29109) | 29109..30245 | - | 1137 | WP_033804283.1 | Outer membrane porin protein OmpD | VF |
| MYF75_RS25025 (30799) | 30799..32027 | + | 1229 | WP_167654659.1 | IS3 family transposase IS2 | Transposase |
| MYF75_RS25030 (32096) | 32096..32285 | + | 190 | Protein_26 | IS66 family insertion sequence element accessory protein TnpB | - |
| MYF75_RS25035 (32288) | 32288..32476 | - | 189 | WP_063073487.1 | DUF1187 family protein | - |
| MYF75_RS25040 (32556) | 32556..33044 | + | 489 | Protein_28 | IS91 family transposase ISSbo1 | Transposase |
| MYF75_RS25045 (33311) | 33311..33586 | - | 276 | WP_063073486.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MYF75_RS25050 (33586) | 33586..33870 | - | 285 | WP_062894229.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| MYF75_RS25055 (34781) | 34781..35638 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| MYF75_RS25060 (35631) | 35631..36113 | - | 483 | WP_074149688.1 | hypothetical protein | - |
| MYF75_RS25065 (36106) | 36106..36153 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| MYF75_RS25070 (36144) | 36144..36395 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| MYF75_RS25075 (36412) | 36412..36669 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| MYF75_RS25080 (36932) | 36932..37078 | - | 147 | Protein_36 | Hok/Gef family protein | - |
| - (37122) | 37122..37183 | + | 62 | NuclAT_2 | - | - |
| - (37122) | 37122..37183 | + | 62 | NuclAT_2 | - | - |
| - (37122) | 37122..37183 | + | 62 | NuclAT_2 | - | - |
| - (37122) | 37122..37183 | + | 62 | NuclAT_2 | - | - |
| MYF75_RS25085 (37766) | 37766..37978 | - | 213 | WP_032084501.1 | hypothetical protein | - |
| MYF75_RS25090 (38112) | 38112..38672 | - | 561 | WP_063073483.1 | fertility inhibition protein FinO | - |
| MYF75_RS25095 (38727) | 38727..39473 | - | 747 | WP_063073482.1 | conjugal transfer pilus acetylase TraX | - |
| MYF75_RS25100 (39493) | 39493..44763 | - | 5271 | WP_063073481.1 | Multifunctional conjugation protein TraI | Relaxase |
| MYF75_RS25105 (44763) | 44763..46934 | - | 2172 | WP_001589502.1 | type IV conjugative transfer system coupling protein TraD | - |
| MYF75_RS25110 (47186) | 47186..47917 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| MYF75_RS25115 (47931) | 47931..48440 | - | 510 | WP_063073480.1 | conjugal transfer entry exclusion protein TraS | - |
| MYF75_RS25120 (48437) | 48437..51262 | - | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MYF75_RS25125 (51259) | 51259..52632 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| MYF75_RS25130 (52632) | 52632..52994 | - | 363 | WP_074149687.1 | P-type conjugative transfer protein TrbJ | - |
| MYF75_RS25135 (52924) | 52924..53469 | - | 546 | WP_000052614.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MYF75_RS25140 (53456) | 53456..53740 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MYF75_RS25145 (53859) | 53859..54206 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| MYF75_RS25150 (54222) | 54222..54965 | - | 744 | WP_063073478.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MYF75_RS25155 (54958) | 54958..55215 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| MYF75_RS25160 (55242) | 55242..57050 | - | 1809 | WP_033804337.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MYF75_RS25165 (57047) | 57047..57685 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MYF75_RS25170 (57694) | 57694..58686 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| MYF75_RS25175 (58683) | 58683..59315 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MYF75_RS25180 (59312) | 59312..59698 | - | 387 | WP_001585100.1 | type-F conjugative transfer system protein TrbI | - |
| MYF75_RS25185 (59695) | 59695..62322 | - | 2628 | WP_033804336.1 | type IV secretion system protein TraC | - |
| MYF75_RS25190 (62481) | 62481..62702 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| MYF75_RS25195 (62837) | 62837..63352 | - | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MYF75_RS25200 (63352) | 63352..63669 | - | 318 | WP_024189706.1 | conjugal transfer protein TrbD | - |
| MYF75_RS25205 (63656) | 63656..64243 | - | 588 | WP_063073477.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MYF75_RS25210 (64233) | 64233..65660 | - | 1428 | WP_000146636.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MYF75_RS25215 (65660) | 65660..66388 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| MYF75_RS25220 (66375) | 66375..66941 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| MYF75_RS25225 (66963) | 66963..67274 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| MYF75_RS25230 (67289) | 67289..67654 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| MYF75_RS25235 (67688) | 67688..67915 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| MYF75_RS25240 (68011) | 68011..68697 | - | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| MYF75_RS25245 (68888) | 68888..69271 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MYF75_RS25250 (69548) | 69548..70195 | + | 648 | WP_148726238.1 | hypothetical protein | VF |
| MYF75_RS25255 (70492) | 70492..71313 | - | 822 | WP_033804334.1 | DUF932 domain-containing protein | - |
| MYF75_RS25260 (71432) | 71432..71719 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| MYF75_RS25265 (71744) | 71744..71950 | - | 207 | WP_033804333.1 | hypothetical protein | - |
| MYF75_RS25270 (72020) | 72020..72193 | + | 174 | Protein_74 | hypothetical protein | - |
| MYF75_RS25275 (72191) | 72191..72421 | - | 231 | WP_071845785.1 | hypothetical protein | - |
| MYF75_RS25280 (72641) | 72641..72766 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MYF75_RS25285 (72708) | 72708..72857 | - | 150 | Protein_77 | plasmid maintenance protein Mok | - |
| - (72843) | 72843..72881 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - (72843) | 72843..72881 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - (72843) | 72843..72881 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - (72843) | 72843..72881 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - (74323) | 74323..74513 | - | 191 | NuclAT_0 | - | - |
| - (74323) | 74323..74513 | - | 191 | NuclAT_0 | - | - |
| - (74323) | 74323..74513 | - | 191 | NuclAT_0 | - | - |
| - (74323) | 74323..74513 | - | 191 | NuclAT_0 | - | - |
| MYF75_RS25295 (74325) | 74325..74513 | + | 189 | WP_063073474.1 | hypothetical protein | - |
| MYF75_RS25300 (74482) | 74482..75244 | - | 763 | Protein_80 | plasmid SOS inhibition protein A | - |
| MYF75_RS25305 (75241) | 75241..75675 | - | 435 | WP_000845907.1 | conjugation system SOS inhibitor PsiB | - |
| MYF75_RS25310 (75730) | 75730..77688 | - | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| MYF75_RS25315 (77753) | 77753..77986 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| MYF75_RS25320 (78048) | 78048..78500 | - | 453 | WP_000290842.1 | single-stranded DNA-binding protein | - |
| MYF75_RS25325 (78526) | 78526..78732 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| MYF75_RS25330 (78973) | 78973..79230 | - | 258 | WP_023147917.1 | hypothetical protein | - |
| MYF75_RS25335 (79143) | 79143..79355 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| MYF75_RS25340 (79381) | 79381..79944 | - | 564 | WP_241095184.1 | class I SAM-dependent methyltransferase | - |
| MYF75_RS25345 (79992) | 79992..81353 | - | 1362 | WP_014106968.1 | DUF3560 domain-containing protein | - |
| MYF75_RS25350 (81405) | 81405..81635 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| MYF75_RS25355 (82673) | 82673..82864 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| MYF75_RS25360 (82861) | 82861..83295 | - | 435 | WP_014106967.1 | DUF1380 family protein | - |
| MYF75_RS25365 (83342) | 83342..83767 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| MYF75_RS25370 (84184) | 84184..84960 | - | 777 | WP_063073488.1 | hypothetical protein | - |
| MYF75_RS25375 (85011) | 85011..85529 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| MYF75_RS25380 (85459) | 85459..85680 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| MYF75_RS25385 (85681) | 85681..86364 | - | 684 | WP_001775017.1 | DNA methylase | - |
| MYF75_RS25390 (86441) | 86441..86746 | - | 306 | WP_063073472.1 | hypothetical protein | - |
| MYF75_RS25395 (86750) | 86750..87652 | - | 903 | WP_148934335.1 | DUF1281 domain-containing protein | - |
| MYF75_RS25400 (88070) | 88070..88318 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| MYF75_RS25405 (88315) | 88315..88752 | + | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MYF75_RS25410 (88752) | 88752..90022 | + | 1271 | Protein_102 | Y-family DNA polymerase | - |
| MYF75_RS25415 (90027) | 90027..90419 | - | 393 | WP_063073471.1 | plasmid partitioning/stability family protein | - |
| MYF75_RS25420 (90424) | 90424..91395 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| MYF75_RS25425 (91624) | 91624..92268 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| MYF75_RS25430 (92262) | 92262..92537 | + | 276 | WP_050858693.1 | hypothetical protein | - |
| MYF75_RS25435 (92689) | 92689..93480 | - | 792 | WP_000016494.1 | site-specific integrase | - |
| MYF75_RS25440 (93477) | 93477..93983 | - | 507 | WP_001505085.1 | hypothetical protein | - |
| MYF75_RS25445 (93974) | 93974..94678 | + | 705 | WP_001775011.1 | IS6-like element IS26 family transposase | - |
| MYF75_RS25450 (94825) | 94825..95001 | - | 177 | Protein_110 | hypothetical protein | - |
| MYF75_RS25455 (94958) | 94958..95188 | + | 231 | WP_063073411.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MYF75_RS25460 (95185) | 95185..95601 | + | 417 | WP_063073410.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MYF75_RS25465 (95675) | 95675..97237 | + | 1563 | WP_063073409.1 | AAA family ATPase | - |
| MYF75_RS25470 (97222) | 97222..98244 | + | 1023 | WP_063073408.1 | hypothetical protein | - |
| MYF75_RS25475 (98531) | 98531..98761 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| MYF75_RS25480 (98758) | 98758..98853 | + | 96 | Protein_116 | VapC toxin family PIN domain ribonuclease | - |
| MYF75_RS25485 (98912) | 98912..99696 | - | 785 | Protein_117 | IS21-like element helper ATPase IstB | - |
| MYF75_RS25490 (99696) | 99696..100349 | - | 654 | Protein_118 | IS21 family transposase IS21 | Transposase |
| MYF75_RS25495 (102105) | 102105..102746 | + | 642 | WP_089533208.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|