MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP094332 Location: 847706..859031 Organism: Salmonella enterica subsp. enterica strain 3018683606 Replicon: chromosome
Accession: NZ_CP094332 Location: 847706..859031 Organism: Salmonella enterica subsp. enterica strain 3018683606 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MQF88_RS04055 (843152) | 843152..844250 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| MQF88_RS04060 (844260) | 844260..845777 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| MQF88_RS04065 (845853) | 845853..846398 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| MQF88_RS04070 (846663) | 846663..847421 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| MQF88_RS04080 (847706) | 847706..848512 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| MQF88_RS04085 (848787) | 848787..849038 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| MQF88_RS04090 (849215) | 849215..849442 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| MQF88_RS04095 (849442) | 849442..849840 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| MQF88_RS04100 (850646) | 850646..851182 | + | 537 | WP_001038506.1 | hypothetical protein | VF |
| MQF88_RS04105 (851229) | 851229..851861 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| MQF88_RS04110 (852580) | 852580..853164 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| MQF88_RS04115 (853284) | 853284..855773 | + | 2490 | WP_000705483.1 | Heme/hemopexin transporter protein HuxB | VF |
| MQF88_RS04120 (855814) | 855814..856557 | + | 744 | WP_000798504.1 | Heme/hemopexin-binding protein | VF |
| MQF88_RS04125 (856554) | 856554..857630 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| MQF88_RS04130 (857774) | 857774..858286 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| MQF88_RS04135 (858273) | 858273..859031 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| MQF88_RS04140 (859241) | 859241..860101 | - | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| MQF88_RS04145 (860223) | 860223..860495 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| MQF88_RS04150 (860526) | 860526..861755 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| MQF88_RS04155 (861897) | 861897..862352 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| MQF88_RS04160 (862456) | 862456..863319 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |