MGE detailed information
MGE type: Conjugative plasmid MGE length: 108771 bp
Accession: NZ_CP091678 Location: 1..108771 Organism: Escherichia coli strain KFu022 Replicon: plasmid pKFu022_1
Accession: NZ_CP091678 Location: 1..108771 Organism: Escherichia coli strain KFu022 Replicon: plasmid pKFu022_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L66_RS22785 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| L6L66_RS22790 (2100) | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| L6L66_RS22795 (3289) | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| L6L66_RS22800 (3639) | 3639..4211 | + | 573 | Protein_3 | EamA family transporter | - |
| L6L66_RS22805 (4243) | 4243..5442 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| L6L66_RS22810 (5548) | 5548..6198 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| L6L66_RS22815 (6230) | 6230..6418 | - | 189 | WP_001191969.1 | hypothetical protein | - |
| L6L66_RS22820 (6425) | 6425..6835 | - | 411 | Protein_7 | recombinase family protein | - |
| L6L66_RS22825 (6900) | 6900..7604 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L6L66_RS22830 (7657) | 7657..8412 | + | 756 | Protein_9 | IS110 family transposase IS5075 | Transposase |
| L6L66_RS22835 (8684) | 8684..8770 | - | 87 | Protein_10 | Arm DNA-binding domain-containing protein | - |
| L6L66_RS22840 (9100) | 9100..9915 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| L6L66_RS22845 (10002) | 10002..10244 | + | 243 | Protein_12 | phosphoglucosamine mutase | - |
| L6L66_RS22850 (10480) | 10480..11625 | - | 1146 | Protein_13 | IS91 family transposase ISVsa3 | Transposase |
| L6L66_RS22855 (11983) | 11983..12252 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| L6L66_RS22860 (12252) | 12252..12530 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| L6L66_RS22865 (12570) | 12570..13418 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| L6L66_RS22870 (13535) | 13535..14008 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| L6L66_RS22875 (14485) | 14485..14751 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| L6L66_RS22880 (14751) | 14751..15245 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| L6L66_RS22885 (15301) | 15301..15903 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| L6L66_RS22890 (16257) | 16257..17603 | + | 1347 | WP_001132032.1 | protein YagA | - |
| L6L66_RS22895 (17882) | 17882..19762 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| L6L66_RS22900 (19780) | 19780..20127 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| L6L66_RS22905 (20246) | 20246..20594 | + | 349 | Protein_24 | DUF6404 family protein | - |
| L6L66_RS22910 (20614) | 20614..21204 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| L6L66_RS22915 (21204) | 21204..21461 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| L6L66_RS22920 (21812) | 21812..22813 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| L6L66_RS22925 (22989) | 22989..23333 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| L6L66_RS22930 (23832) | 23832..24086 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| L6L66_RS22935 (24131) | 24131..25057 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| L6L66_RS22940 (25589) | 25589..26002 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| L6L66_RS22945 (26004) | 26004..26783 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| L6L66_RS22950 (26963) | 26963..27607 | + | 645 | WP_001144036.1 | ParA family protein | - |
| L6L66_RS22955 (27694) | 27694..28002 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| L6L66_RS22960 (28416) | 28416..29396 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| L6L66_RS22965 (29389) | 29389..29805 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| L6L66_RS22970 (29807) | 29807..29968 | - | 162 | Protein_37 | DUF4113 domain-containing protein | - |
| L6L66_RS22975 (29998) | 29998..31569 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| L6L66_RS22980 (31589) | 31589..31936 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| L6L66_RS22985 (31936) | 31936..32613 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| L6L66_RS22990 (32709) | 32709..33125 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| L6L66_RS22995 (33127) | 33127..34401 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| L6L66_RS23000 (34401) | 34401..34838 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| L6L66_RS23005 (34835) | 34835..35083 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| L6L66_RS23010 (35501) | 35501..36403 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| L6L66_RS23015 (36400) | 36400..36711 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| L6L66_RS23020 (36788) | 36788..37471 | + | 684 | WP_000086178.1 | DNA methylase | - |
| L6L66_RS23025 (37472) | 37472..37693 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| L6L66_RS23030 (37653) | 37653..38139 | + | 487 | Protein_49 | DUF1380 family protein | - |
| L6L66_RS23035 (38190) | 38190..38960 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| L6L66_RS23040 (39378) | 39378..39803 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| L6L66_RS23045 (39850) | 39850..40272 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| L6L66_RS23050 (40269) | 40269..40460 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| L6L66_RS23055 (40531) | 40531..40878 | + | 348 | WP_001398159.1 | hypothetical protein | - |
| L6L66_RS23060 (41230) | 41230..41757 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| L6L66_RS23065 (41815) | 41815..42048 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| L6L66_RS23070 (42107) | 42107..44065 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| L6L66_RS23075 (44120) | 44120..44554 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| L6L66_RS23080 (44551) | 44551..45270 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| L6L66_RS23085 (45267) | 45267..45863 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| L6L66_RS23090 (46326) | 46326..46826 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| L6L66_RS23095 (47555) | 47555..47989 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| L6L66_RS23100 (48081) | 48081..48347 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| L6L66_RS23105 (48412) | 48412..49353 | + | 942 | WP_000038339.1 | hypothetical protein | VF |
| L6L66_RS23110 (49415) | 49415..49585 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| L6L66_RS23115 (49616) | 49616..49867 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| L6L66_RS23120 (50447) | 50447..51295 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| L6L66_RS23125 (51380) | 51380..51715 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| L6L66_RS23130 (51949) | 51949..52281 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| L6L66_RS23135 (52292) | 52292..54991 | + | 2700 | WP_024143648.1 | hypothetical protein | Relaxase |
| L6L66_RS23140 (55028) | 55028..57319 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| L6L66_RS23145 (57312) | 57312..58382 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| L6L66_RS23150 (58401) | 58401..59609 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (59789) | 59789..59846 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (59789) | 59789..59846 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (59789) | 59789..59846 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (59789) | 59789..59846 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| L6L66_RS23155 (59901) | 59901..60053 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| L6L66_RS23160 (60125) | 60125..60376 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| L6L66_RS24210 (60875) | 60875..60970 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| L6L66_RS23170 (61035) | 61035..61211 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| L6L66_RS23175 (61603) | 61603..61812 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| L6L66_RS23180 (61884) | 61884..62534 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L6L66_RS23185 (62608) | 62608..64776 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| L6L66_RS23190 (64873) | 64873..65457 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| L6L66_RS23195 (65486) | 65486..66688 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| L6L66_RS23200 (66655) | 66655..67269 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| L6L66_RS23205 (67269) | 67269..70313 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| L6L66_RS23210 (70403) | 70403..71203 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| L6L66_RS23215 (71187) | 71187..71375 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| L6L66_RS23220 (71439) | 71439..71843 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| L6L66_RS23225 (71894) | 71894..72421 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| L6L66_RS23230 (72421) | 72421..73125 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| L6L66_RS23235 (73125) | 73125..74414 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| L6L66_RS23240 (74417) | 74417..75400 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| L6L66_RS23245 (75411) | 75411..76103 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| L6L66_RS23250 (76100) | 76100..76447 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| L6L66_RS23255 (76465) | 76465..80232 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| L6L66_RS23260 (80321) | 80321..80872 | - | 552 | WP_000014583.1 | Cardiolipin synthase A | VF |
| L6L66_RS23265 (80887) | 80887..81177 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| L6L66_RS23270 (81174) | 81174..82322 | - | 1149 | WP_001024972.1 | hypothetical protein | VF |
| L6L66_RS23275 (82319) | 82319..83137 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| L6L66_RS23280 (83134) | 83134..83592 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| L6L66_RS23285 (83987) | 83987..84571 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| L6L66_RS23290 (84631) | 84631..85833 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| L6L66_RS23295 (85918) | 85918..86742 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| L6L66_RS23300 (86893) | 86893..88047 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| L6L66_RS23305 (88341) | 88341..89603 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| L6L66_RS23310 (89891) | 89891..90766 | + | 876 | WP_013188473.1 | hypothetical protein | ARG |
| L6L66_RS23315 (90813) | 90813..91157 | - | 345 | Protein_106 | WbuC family cupin fold metalloprotein | - |
| L6L66_RS23320 (91157) | 91157..91366 | + | 210 | Protein_107 | hypothetical protein | - |
| L6L66_RS23325 (92360) | 92360..93784 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| L6L66_RS23330 (93784) | 93784..94440 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| L6L66_RS23335 (94425) | 94425..94985 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| L6L66_RS23340 (94995) | 94995..95609 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| L6L66_RS23345 (95627) | 95627..96724 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| L6L66_RS23350 (96737) | 96737..98290 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| L6L66_RS23355 (98301) | 98301..98753 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| L6L66_RS23360 (98740) | 98740..100035 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| L6L66_RS23365 (100028) | 100028..101710 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| L6L66_RS23370 (101724) | 101724..102161 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| L6L66_RS23375 (102161) | 102161..103228 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| L6L66_RS23380 (103852) | 103852..104148 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| L6L66_RS23385 (104324) | 104324..104578 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| L6L66_RS23390 (104740) | 104740..105291 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| L6L66_RS23395 (105464) | 105464..106147 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| L6L66_RS23400 (106401) | 106401..106934 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| L6L66_RS23405 (107376) | 107376..107663 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| L6L66_RS23410 (107581) | 107581..107859 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.006 |