MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP091569 Location: 880756..892081 Organism: Salmonella enterica strain 131 Replicon: chromosome
Accession: NZ_CP091569 Location: 880756..892081 Organism: Salmonella enterica strain 131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INN75_RS04260 (876202) | 876202..877300 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| INN75_RS04265 (877310) | 877310..878827 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| INN75_RS04270 (878903) | 878903..879448 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| INN75_RS04275 (879713) | 879713..880471 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| INN75_RS04285 (880756) | 880756..881562 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| INN75_RS04290 (881837) | 881837..882088 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| INN75_RS04295 (882265) | 882265..882492 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| INN75_RS04300 (882492) | 882492..882890 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| INN75_RS04305 (883696) | 883696..884232 | + | 537 | WP_001038506.1 | Transcriptional regulator LytR | VF |
| INN75_RS04310 (884279) | 884279..884911 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| INN75_RS04315 (885630) | 885630..886214 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| INN75_RS04320 (886334) | 886334..888823 | + | 2490 | WP_000705483.1 | hypothetical protein | VF |
| INN75_RS04325 (888864) | 888864..889607 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| INN75_RS04330 (889604) | 889604..890680 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| INN75_RS04335 (890824) | 890824..891336 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| INN75_RS04340 (891323) | 891323..892081 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| INN75_RS04345 (892291) | 892291..893139 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| INN75_RS04350 (893261) | 893261..893533 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| INN75_RS04355 (893564) | 893564..894793 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| INN75_RS04360 (894935) | 894935..895390 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| INN75_RS04365 (895494) | 895494..896357 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |