MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP091566 Location: 269097..280422 Organism: Salmonella enterica strain 137 Replicon: chromosome
Accession: NZ_CP091566 Location: 269097..280422 Organism: Salmonella enterica strain 137 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INN76_RS01265 (264803) | 264803..265666 | - | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
| INN76_RS01270 (265770) | 265770..266225 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| INN76_RS01275 (266367) | 266367..267596 | + | 1230 | WP_000036825.1 | amino acid permease | - |
| INN76_RS01280 (267627) | 267627..267899 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| INN76_RS01285 (268021) | 268021..268887 | + | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| INN76_RS01290 (269097) | 269097..269855 | - | 759 | WP_000134791.1 | transcriptional regulator | - |
| INN76_RS01295 (269842) | 269842..270354 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| INN76_RS01300 (270498) | 270498..271574 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| INN76_RS01305 (271571) | 271571..272314 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| INN76_RS01310 (272355) | 272355..274844 | - | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| INN76_RS01315 (274964) | 274964..275548 | - | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| INN76_RS01320 (276267) | 276267..276899 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| INN76_RS01325 (276946) | 276946..277482 | - | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| INN76_RS01330 (278288) | 278288..278686 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| INN76_RS01335 (278686) | 278686..278913 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| INN76_RS01340 (279090) | 279090..279341 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| INN76_RS01345 (279616) | 279616..280422 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| INN76_RS01355 (280707) | 280707..281465 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| INN76_RS01360 (281730) | 281730..282275 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| INN76_RS01365 (282351) | 282351..283868 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |