MGE detailed information
MGE type: Genomic_island MGE length: 10581 bp
Accession: NZ_CP091563 Location: 3854735..3865315 Organism: Salmonella enterica strain 143 Replicon: chromosome
Accession: NZ_CP091563 Location: 3854735..3865315 Organism: Salmonella enterica strain 143 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INN77_RS19050 (3850663) | 3850663..3851118 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| INN77_RS19055 (3851260) | 3851260..3852489 | + | 1230 | WP_000036825.1 | amino acid permease | - |
| INN77_RS19060 (3852520) | 3852520..3852792 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| INN77_RS19065 (3852914) | 3852914..3853780 | + | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| INN77_RS19070 (3853990) | 3853990..3854748 | - | 759 | WP_000134791.1 | transcriptional regulator | - |
| INN77_RS19075 (3854735) | 3854735..3855247 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| INN77_RS19080 (3855391) | 3855391..3856467 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| INN77_RS19085 (3856464) | 3856464..3857207 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| INN77_RS19090 (3857248) | 3857248..3859737 | - | 2490 | WP_000705483.1 | hypothetical protein | VF |
| INN77_RS19095 (3859857) | 3859857..3860441 | - | 585 | WP_001244638.1 | hypothetical protein | VF |
| INN77_RS19100 (3861160) | 3861160..3861792 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| INN77_RS19105 (3861839) | 3861839..3862375 | - | 537 | WP_001038506.1 | hypothetical protein | VF |
| INN77_RS19110 (3863181) | 3863181..3863579 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| INN77_RS19115 (3863579) | 3863579..3863806 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| INN77_RS19120 (3863983) | 3863983..3864234 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| INN77_RS19125 (3864509) | 3864509..3865315 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| INN77_RS19135 (3865600) | 3865600..3866358 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| INN77_RS19140 (3866623) | 3866623..3867168 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| INN77_RS19145 (3867244) | 3867244..3868761 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.002 |