MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP091558 Location: 3720355..3731680 Organism: Salmonella enterica strain 418 Replicon: chromosome
Accession: NZ_CP091558 Location: 3720355..3731680 Organism: Salmonella enterica strain 418 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INN79_RS18430 (3715801) | 3715801..3716899 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| INN79_RS18435 (3716909) | 3716909..3718426 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| INN79_RS18440 (3718502) | 3718502..3719047 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| INN79_RS18445 (3719312) | 3719312..3720070 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| INN79_RS18455 (3720355) | 3720355..3721161 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| INN79_RS18460 (3721436) | 3721436..3721687 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| INN79_RS18465 (3721864) | 3721864..3722091 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| INN79_RS18470 (3722091) | 3722091..3722489 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| INN79_RS18475 (3723295) | 3723295..3723831 | + | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| INN79_RS18480 (3723878) | 3723878..3724510 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| INN79_RS18485 (3725229) | 3725229..3725813 | + | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| INN79_RS18490 (3725933) | 3725933..3728422 | + | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| INN79_RS18495 (3728463) | 3728463..3729206 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| INN79_RS18500 (3729203) | 3729203..3730279 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| INN79_RS18505 (3730423) | 3730423..3730935 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| INN79_RS18510 (3730922) | 3730922..3731680 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| INN79_RS18515 (3731890) | 3731890..3732750 | - | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| INN79_RS18520 (3732872) | 3732872..3733144 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| INN79_RS18525 (3733175) | 3733175..3734404 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| INN79_RS18530 (3734546) | 3734546..3735001 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| INN79_RS18535 (3735105) | 3735105..3735968 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |