MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP091544 Location: 962756..974081 Organism: Salmonella enterica strain 1618 Replicon: chromosome
Accession: NZ_CP091544 Location: 962756..974081 Organism: Salmonella enterica strain 1618 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L4414_RS04705 (958202) | 958202..959300 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| L4414_RS04710 (959310) | 959310..960827 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| L4414_RS04715 (960903) | 960903..961448 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| L4414_RS04720 (961713) | 961713..962471 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| L4414_RS04730 (962756) | 962756..963562 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| L4414_RS04735 (963837) | 963837..964088 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| L4414_RS04740 (964265) | 964265..964492 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| L4414_RS04745 (964492) | 964492..964890 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| L4414_RS04750 (965696) | 965696..966232 | + | 537 | WP_001038506.1 | Endolytic peptidoglycan transglycosylase RlpA | VF |
| L4414_RS04755 (966279) | 966279..966911 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| L4414_RS04760 (967630) | 967630..968214 | + | 585 | WP_001244638.1 | Glutamyl-tRNA(Gln) amidotransferase subunit A | VF |
| L4414_RS04765 (968334) | 968334..970823 | + | 2490 | WP_000705483.1 | Glutamyl-tRNA(Gln) amidotransferase subunit C | VF |
| L4414_RS04770 (970864) | 970864..971607 | + | 744 | WP_000798504.1 | Rod shape-determining protein MreB | VF |
| L4414_RS04775 (971604) | 971604..972680 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| L4414_RS04780 (972824) | 972824..973336 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| L4414_RS04785 (973323) | 973323..974081 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| L4414_RS04790 (974291) | 974291..975175 | - | 885 | WP_000503677.1 | nickel/cobalt efflux protein RcnA | - |
| L4414_RS04795 (975297) | 975297..975569 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| L4414_RS04800 (975600) | 975600..976829 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| L4414_RS04805 (976971) | 976971..977426 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| L4414_RS04810 (977530) | 977530..978393 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |