MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP091542 Location: 847699..859024 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S58L2 Replicon: chromosome
Accession: NZ_CP091542 Location: 847699..859024 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S58L2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5Z53_RS04070 (843145) | 843145..844243 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| L5Z53_RS04075 (844253) | 844253..845770 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| L5Z53_RS04080 (845846) | 845846..846391 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| L5Z53_RS04085 (846656) | 846656..847414 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| L5Z53_RS04095 (847699) | 847699..848505 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| L5Z53_RS04100 (848780) | 848780..849031 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| L5Z53_RS04105 (849208) | 849208..849435 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| L5Z53_RS04110 (849435) | 849435..849833 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| L5Z53_RS04115 (850639) | 850639..851175 | + | 537 | WP_001038506.1 | Biopolymer transport protein ExbD | VF |
| L5Z53_RS04120 (851222) | 851222..851854 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| L5Z53_RS04125 (852573) | 852573..853157 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| L5Z53_RS04130 (853277) | 853277..855766 | + | 2490 | WP_000705483.1 | L-glyceraldehyde 3-phosphate reductase | VF |
| L5Z53_RS04135 (855807) | 855807..856550 | + | 744 | WP_000798504.1 | Carboxymethylenebutenolidase | VF |
| L5Z53_RS04140 (856547) | 856547..857623 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| L5Z53_RS04145 (857767) | 857767..858279 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| L5Z53_RS04150 (858266) | 858266..859024 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| L5Z53_RS04155 (859234) | 859234..860088 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| L5Z53_RS04160 (860210) | 860210..860482 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| L5Z53_RS04165 (860513) | 860513..861742 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| L5Z53_RS04170 (861884) | 861884..862339 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| L5Z53_RS04175 (862443) | 862443..863306 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |