MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP090930 Location: 1055835..1056011 Organism: Salmonella enterica subsp. enterica serovar Agona strain R21.2430 Replicon: chromosome
Accession: NZ_CP090930 Location: 1055835..1056011 Organism: Salmonella enterica subsp. enterica serovar Agona strain R21.2430 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1L23_RS05135 (1052384) | 1052384..1052805 | + | 422 | Protein_1008 | cytoplasmic protein | - |
| L1L23_RS05140 (1052973) | 1052973..1053212 | + | 240 | Protein_1009 | hypothetical protein | - |
| L1L23_RS05145 (1053369) | 1053369..1054037 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| L1L23_RS05150 (1054064) | 1054064..1054558 | + | 495 | WP_000424943.1 | hypothetical protein | - |
| L1L23_RS05155 (1054803) | 1054803..1055459 | - | 657 | WP_000420449.1 | protein-serine/threonine phosphatase | - |
| L1L23_RS05160 (1055809) | 1055809..1056011 | + | 203 | Protein_1013 | IS5 family transposase ISEcl3 | Transposase |
| L1L23_RS05165 (1056084) | 1056084..1056611 | - | 528 | WP_000971656.1 | GNAT family N-acetyltransferase | Toxin Detail |
| L1L23_RS05170 (1056608) | 1056608..1056898 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| L1L23_RS05175 (1057491) | 1057491..1057817 | + | 327 | WP_000393296.1 | hypothetical protein | - |
| L1L23_RS05180 (1058090) | 1058090..1058437 | - | 348 | WP_001555786.1 | DUF1493 family protein | - |
| L1L23_RS05185 (1058422) | 1058422..1058871 | - | 450 | WP_000381619.1 | hypothetical protein | - |
| L1L23_RS05190 (1059303) | 1059303..1059746 | - | 444 | WP_000715096.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| L1L23_RS05195 (1060202) | 1060202..1060852 | + | 651 | WP_001747511.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0.007 |