MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP090535 Location: 901312..901488 Organism: Salmonella enterica strain 2016089-SE Replicon: chromosome
Accession: NZ_CP090535 Location: 901312..901488 Organism: Salmonella enterica strain 2016089-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F58_RS04375 (896375) | 896375..897025 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| L0F58_RS04380 (897482) | 897482..897925 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| L0F58_RS04385 (898356) | 898356..898805 | + | 450 | WP_000381610.1 | membrane protein | - |
| L0F58_RS04390 (898790) | 898790..899137 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| L0F58_RS04395 (899410) | 899410..899736 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| L0F58_RS04400 (899977) | 899977..900155 | + | 179 | Protein_862 | IS3 family transposase | - |
| L0F58_RS04405 (900425) | 900425..900715 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| L0F58_RS04410 (900712) | 900712..901239 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| L0F58_RS04415 (901312) | 901312..901517 | - | 206 | Protein_865 | IS5 family transposase ISEcl3 | Transposase |
| L0F58_RS04420 (901864) | 901864..902520 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| L0F58_RS04425 (902692) | 902692..903213 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| L0F58_RS04430 (903372) | 903372..905939 | + | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| L0F58_RS04435 (905995) | 905995..906375 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |