MGE detailed information

MGE type: Conjugative plasmid        MGE length: 152520 bp
Accession: NZ_CP089099        Location: 1..152520         Organism: Klebsiella pneumoniae strain EH13       Replicon: plasmid pEH13_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LSG42_RS27715 (1) 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
LSG42_RS27720 (1263) 1263..2003 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
LSG42_RS27725 (2124) 2124..2306 - 183 WP_042344623.1 hypothetical protein -
LSG42_RS27730 (2373) 2373..2662 - 290 Protein_3 type II toxin-antitoxin system RelE/ParE family toxin -
LSG42_RS27735 (2649) 2649..2917 - 269 Protein_4 type II toxin-antitoxin system ParD family antitoxin -
LSG42_RS27740 (3078) 3078..4306 + 1229 WP_113708090.1 IS3 family transposase IS2 Transposase
LSG42_RS27745 (4785) 4785..5699 + 915 WP_223429136.1 hypothetical protein -
LSG42_RS27750 (5988) 5988..6116 + 129 Protein_7 IS481 family transposase -
LSG42_RS27755 (6151) 6151..6444 - 294 WP_001105060.1 hypothetical protein -
LSG42_RS27760 (6550) 6550..6825 - 276 WP_000421272.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LSG42_RS27765 (6825) 6825..7109 - 285 WP_001387467.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
LSG42_RS27770 (7714) 7714..8466 + 753 WP_000562172.1 IclR family transcriptional regulator -
LSG42_RS27775 (8512) 8512..8781 - 270 Protein_12 2-keto-3-deoxygluconate permease -
LSG42_RS27780 (8842) 8842..9546 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
LSG42_RS27785 (9599) 9599..9835 - 237 Protein_14 DUF3330 domain-containing protein -
LSG42_RS27790 (10038) 10038..11051 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
LSG42_RS27795 (11200) 11200..12038 + 839 Protein_16 Streptomycin 3''-adenylyltransferase ARG
LSG42_RS27805 (13113) 13113..13385 - 273 Protein_18 IS1 family transposase -
LSG42_RS27810 (13479) 13479..14912 + 1434 WP_001288435.1 DNA cytosine methyltransferase -
LSG42_RS27815 (14946) 14946..16160 - 1215 WP_001532073.1 type II site-specific deoxyribonuclease -
LSG42_RS27820 (16455) 16455..17159 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
LSG42_RS27825 (17224) 17224..17403 - 180 Protein_22 helix-turn-helix domain-containing protein -
LSG42_RS27830 (17554) 17554..18459 - 906 WP_052259183.1 rRNA adenine N-6-methyltransferase ARG
LSG42_RS27835 (18879) 18879..19589 + 711 WP_194433555.1 Tn3 family transposase TnpR_TnEc1 Transposase
LSG42_RS27840 (19586) 19586..19810 + 225 WP_000743213.1 hypothetical protein -
LSG42_RS27845 (20021) 20021..21514 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
LSG42_RS27850 (21750) 21750..21992 - 243 Protein_27 phosphoglucosamine mutase -
LSG42_RS27855 (22079) 22079..22894 - 816 WP_001043265.1 Dihydropteroate synthase ARG
LSG42_RS27860 (23202) 23202..24053 - 852 WP_000240536.1 replication protein C, IncQ-type -
LSG42_RS27865 (24040) 24040..24723 - 684 Protein_30 helicase RepA family protein -
LSG42_RS27870 (24778) 24778..25482 - 705 WP_032199621.1 IS6-like element IS26 family transposase -
LSG42_RS27875 (25547) 25547..25921 + 375 Protein_32 Tn3 family transposase TnpR_Tn3 Transposase
LSG42_RS27880 (25937) 25937..28033 + 2097 WP_000422420.1 hypothetical protein -
LSG42_RS27885 (28145) 28145..30064 - 1920 WP_104774283.1 Tetracycline resistance protein TetM from transposon TnFO1 VF
LSG42_RS27890 (30080) 30080..30196 - 117 WP_001791010.1 tetracycline resistance determinant leader peptide -
LSG42_RS27895 (30441) 30441..30764 - 324 Protein_36 conjugal transfer protein -
LSG42_RS27900 (30799) 30799..33792 - 2994 WP_104774284.1 Tn3 family transposase ISEc63 Transposase
LSG42_RS27905 (33848) 33848..34552 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
LSG42_RS27910 (35047) 35047..35631 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
LSG42_RS27915 (35631) 35631..36869 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
LSG42_RS27920 (36866) 36866..37771 - 906 WP_000219391.1 hypothetical protein ARG
LSG42_RS27925 (37893) 37893..38597 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
LSG42_RS27930 (38732) 38732..38827 + 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
LSG42_RS27935 (38953) 38953..39690 + 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
LSG42_RS27940 (40320) 40320..40769 + 450 WP_013362817.1 hypothetical protein -
LSG42_RS27945 (40730) 40730..41071 + 342 WP_023909256.1 60 kDa chaperonin 2 VF
LSG42_RS27950 (41346) 41346..42830 + 1485 WP_194280410.1 IS91 family transposase ISVsa3 Transposase
LSG42_RS27955 (43153) 43153..43857 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
LSG42_RS27960 (43923) 43923..44210 + 288 Protein_49 IS1380 family transposase ISEcp1 Transposase
LSG42_RS27965 (44460) 44460..45335 + 876 WP_001617865.1 Beta-lactamase CTX-M-97 ARG
LSG42_RS27970 (45370) 45370..46338 + 969 WP_013362812.1 IS5 family transposase IS903B Transposase
LSG42_RS27975 (46395) 46395..46967 - 573 Protein_52 IS1380 family transposase ISEcp1 Transposase
LSG42_RS27980 (47168) 47168..48199 + 1032 WP_014342102.1 Methyl-accepting chemotaxis protein McpQ VF
LSG42_RS27985 (48388) 48388..48597 - 210 Protein_54 dihydropteroate synthase -
LSG42_RS27990 (48591) 48591..48938 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
LSG42_RS27995 (49130) 49130..50389 - 1260 Protein_56 Inner membrane transport protein YdhC ARG
LSG42_RS28000 (50656) 50656..51210 - 555 WP_032488579.1 aminoglycoside N-acetyltransferase AAC(6')-Ib3 -
LSG42_RS28005 (51390) 51390..52070 + 681 Protein_58 IS91 family transposase ISAzo26 Transposase
LSG42_RS28010 (52135) 52135..52839 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LSG42_RS28015 (52905) 52905..53450 + 546 Protein_60 Tn3 family transposase TnpA_Tn3 Transposase
LSG42_RS28020 (53486) 53486..53901 - 416 Protein_61 IS1-like element IS1B family transposase -
LSG42_RS28025 (54150) 54150..54551 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
LSG42_RS28030 (54484) 54484..54741 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
LSG42_RS28035 (54834) 54834..55487 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
LSG42_RS28040 (56301) 56301..57872 - 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
LSG42_RS28045 (57892) 57892..58239 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
LSG42_RS28050 (58239) 58239..58916 - 678 WP_001682408.1 IS66 family transposase ISCro1 Transposase
LSG42_RS28055 (59133) 59133..59990 - 858 WP_000130646.1 incFII family plasmid replication initiator RepA -
LSG42_RS28060 (59983) 59983..60057 - 75 WP_001365705.1 RepA leader peptide Tap -
LSG42_RS28065 (60295) 60295..60549 - 255 WP_000083830.1 replication regulatory protein RepA -
LSG42_RS28070 (60789) 60789..61379 - 591 WP_000766807.1 DUF2726 domain-containing protein -
LSG42_RS28075 (61417) 61417..61626 - 210 WP_001298565.1 hemolysin expression modulator Hha -
LSG42_RS28080 (61672) 61672..62133 - 462 WP_001233838.1 thermonuclease family protein -
LSG42_RS28085 (62378) 62378..62590 - 213 WP_001309245.1 ANR family transcriptional regulator -
LSG42_RS28090 (62719) 62719..63279 - 561 WP_000139323.1 fertility inhibition protein FinO -
LSG42_RS28095 (63382) 63382..64242 - 861 WP_000704523.1 putative protein YcjY VF
LSG42_RS28100 (64301) 64301..65047 - 747 WP_000205725.1 conjugal transfer pilus acetylase TraX -
LSG42_RS28105 (65067) 65067..70337 - 5271 WP_000948354.1 Multifunctional conjugation protein TraI Relaxase
LSG42_RS28110 (70337) 70337..72535 - 2199 WP_000009332.1 type IV conjugative transfer system coupling protein TraD -
LSG42_RS28115 (72586) 72586..73323 - 738 WP_000199905.1 hypothetical protein -
LSG42_RS28120 (73526) 73526..74257 - 732 WP_000782451.1 conjugal transfer complement resistance protein TraT -
LSG42_RS28125 (74306) 74306..74791 - 486 WP_000605870.1 hypothetical protein -
LSG42_RS28130 (74807) 74807..77629 - 2823 WP_001007039.1 conjugal transfer mating-pair stabilization protein TraG -
LSG42_RS28135 (77626) 77626..79008 - 1383 WP_001309243.1 conjugal transfer pilus assembly protein TraH -
LSG42_RS28140 (78986) 78986..79378 - 393 WP_000660699.1 F-type conjugal transfer protein TrbF -
LSG42_RS28145 (79359) 79359..79706 - 348 WP_001309242.1 P-type conjugative transfer protein TrbJ -
LSG42_RS28150 (79636) 79636..80181 - 546 WP_000059831.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
LSG42_RS28155 (80168) 80168..80452 - 285 WP_000624194.1 type-F conjugative transfer system pilin chaperone TraQ -
LSG42_RS28160 (80571) 80571..80915 - 345 WP_000556796.1 conjugal transfer protein TrbA -
LSG42_RS28165 (80929) 80929..81678 - 750 WP_001336806.1 type-F conjugative transfer system pilin assembly protein TraF -
LSG42_RS28170 (81665) 81665..81922 - 258 WP_000864353.1 conjugal transfer protein TrbE -
LSG42_RS28175 (81949) 81949..83799 - 1851 WP_000821856.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
LSG42_RS28180 (83796) 83796..84434 - 639 WP_001080256.1 type-F conjugative transfer system pilin assembly protein TrbC -
LSG42_RS28185 (84443) 84443..84748 - 306 WP_000224416.1 hypothetical protein -
LSG42_RS28190 (84778) 84778..85770 - 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
LSG42_RS28195 (85767) 85767..86399 - 633 WP_001203728.1 type-F conjugative transfer system protein TraW -
LSG42_RS28200 (86396) 86396..86782 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
LSG42_RS28205 (86779) 86779..89409 - 2631 WP_000069777.1 type IV secretion system protein TraC -
LSG42_RS28210 (89535) 89535..89882 - 348 WP_000836682.1 hypothetical protein -
LSG42_RS28215 (89910) 89910..90128 - 219 WP_000556745.1 hypothetical protein -
LSG42_RS28220 (90208) 90208..90681 - 474 WP_000549568.1 hypothetical protein -
LSG42_RS28225 (90674) 90674..91087 - 414 WP_000549589.1 hypothetical protein -
LSG42_RS28230 (91080) 91080..91301 - 222 WP_001278683.1 conjugal transfer protein TraR -
LSG42_RS28235 (91436) 91436..91951 - 516 WP_000809881.1 type IV conjugative transfer system lipoprotein TraV -
LSG42_RS28240 (91948) 91948..92268 - 321 WP_001057307.1 conjugal transfer protein TrbD -
LSG42_RS28245 (92255) 92255..92821 - 567 WP_000896599.1 conjugal transfer pilus-stabilizing protein TraP -
LSG42_RS28250 (92811) 92811..94262 - 1452 WP_000146675.1 F-type conjugal transfer pilus assembly protein TraB -
LSG42_RS28255 (94262) 94262..94990 - 729 WP_001230772.1 type-F conjugative transfer system secretin TraK -
LSG42_RS28260 (94977) 94977..95543 - 567 WP_000399780.1 type IV conjugative transfer system protein TraE -
LSG42_RS28265 (95565) 95565..95876 - 312 WP_000012113.1 type IV conjugative transfer system protein TraL -
LSG42_RS28270 (95891) 95891..96250 - 360 WP_001098992.1 type IV conjugative transfer system pilin TraA -
LSG42_RS28275 (96283) 96283..96510 - 228 WP_000089263.1 conjugal transfer relaxosome protein TraY -
LSG42_RS28280 (96647) 96647..97318 - 672 WP_000283561.1 conjugal transfer transcriptional regulator TraJ -
LSG42_RS28285 (97512) 97512..97895 - 384 WP_001354030.1 conjugal transfer relaxosome DNA-binding protein TraM -
LSG42_RS28290 (98230) 98230..98820 + 591 WP_000252683.1 hypothetical protein VF
LSG42_RS28295 (99117) 99117..99938 - 822 WP_001234445.1 DUF932 domain-containing protein -
LSG42_RS28300 (100049) 100049..100345 - 297 WP_001272251.1 hypothetical protein -
LSG42_RS28305 (100645) 100645..100941 + 297 Protein_118 hypothetical protein -
LSG42_RS28310 (101260) 101260..101385 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
LSG42_RS28315 (101327) 101327..101476 - 150 Protein_120 plasmid maintenance protein Mok -
- (101462) 101462..101686 - 225 NuclAT_0 - -
- (101462) 101462..101686 - 225 NuclAT_0 - -
- (101462) 101462..101686 - 225 NuclAT_0 - -
- (101462) 101462..101686 - 225 NuclAT_0 - -
LSG42_RS28320 (101698) 101698..102417 - 720 WP_001276217.1 plasmid SOS inhibition protein A -
LSG42_RS28325 (102414) 102414..102848 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
LSG42_RS28330 (102917) 102917..104940 - 2024 Protein_123 ParB/RepB/Spo0J family partition protein -
LSG42_RS28335 (105001) 105001..105234 - 234 WP_000006003.1 DUF905 family protein -
LSG42_RS28340 (105292) 105292..105819 - 528 WP_000290834.1 single-stranded DNA-binding protein -
LSG42_RS28345 (106121) 106121..106576 + 456 Protein_126 hypothetical protein -
LSG42_RS28350 (106662) 106662..107225 - 564 WP_001298559.1 class I SAM-dependent methyltransferase -
LSG42_RS28355 (107272) 107272..108633 - 1362 WP_000170695.1 DUF3560 domain-containing protein -
LSG42_RS28360 (108685) 108685..108915 - 231 WP_000218642.1 hypothetical protein -
LSG42_RS28365 (109432) 109432..109680 + 249 WP_077249352.1 hypothetical protein -
LSG42_RS28370 (109953) 109953..110144 - 192 WP_001027516.1 hypothetical protein -
LSG42_RS28375 (110141) 110141..110563 - 423 WP_000271753.1 DUF1380 family protein -
LSG42_RS28380 (110610) 110610..111035 - 426 WP_001198928.1 antirestriction protein -
LSG42_RS28385 (111452) 111452..112228 - 777 WP_001753849.1 hypothetical protein -
LSG42_RS28390 (112279) 112279..112797 - 519 WP_123325260.1 DUF1380 family protein -
LSG42_RS28395 (112727) 112727..112948 - 222 WP_001104873.1 hypothetical protein -
LSG42_RS28400 (112949) 112949..113632 - 684 WP_000086185.1 DNA methylase -
LSG42_RS28405 (113709) 113709..114020 - 312 WP_011254640.1 hypothetical protein -
LSG42_RS28410 (114017) 114017..114919 - 903 WP_001348615.1 DUF1281 domain-containing protein -
LSG42_RS28415 (115786) 115786..116757 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
LSG42_RS28420 (116757) 116757..117923 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
LSG42_RS28425 (118511) 118511..119266 - 756 WP_000852146.1 replication initiation protein RepE -
LSG42_RS28430 (120040) 120040..120846 - 807 WP_000016982.1 site-specific integrase -
LSG42_RS28435 (120847) 120847..121152 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
LSG42_RS28440 (121154) 121154..121372 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
LSG42_RS28445 (121940) 121940..122452 + 513 WP_000151784.1 hypothetical protein -
LSG42_RS28450 (122486) 122486..123619 - 1134 WP_001542067.1 DUF3800 domain-containing protein -
LSG42_RS28455 (123786) 123786..124559 - 774 WP_000905949.1 hypothetical protein -
LSG42_RS28460 (124572) 124572..125072 - 501 WP_000528931.1 HEPN family nuclease -
LSG42_RS28465 (125337) 125337..125567 + 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
LSG42_RS28470 (125564) 125564..125980 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
LSG42_RS28475 (126025) 126025..129819 - 3795 WP_001144732.1 hypothetical protein -
LSG42_RS28480 (130166) 130166..130396 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
LSG42_RS28485 (130393) 130393..130809 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
LSG42_RS28490 (130884) 130884..132449 + 1566 WP_001128474.1 AAA family ATPase -
LSG42_RS28495 (132434) 132434..133456 + 1023 WP_000361402.1 helicase UvrD -
LSG42_RS28505 (134787) 134787..136988 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
LSG42_RS28510 (137014) 137014..138347 - 1334 Protein_159 L-lysine N6-monooxygenase VF
LSG42_RS28515 (138344) 138344..140086 - 1743 WP_001015721.1 Aerobactin synthase VF
LSG42_RS28520 (140086) 140086..141033 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
LSG42_RS28525 (141034) 141034..142758 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
LSG42_RS28530 (142894) 142894..144087 + 1194 WP_000095526.1 MFS transporter -
LSG42_RS28535 (144467) 144467..144847 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
LSG42_RS28540 (145188) 145188..145601 - 414 Protein_165 phosphopyruvate hydratase -
LSG42_RS28545 (145608) 145608..145856 + 249 Protein_166 Tn3 family transposase -
LSG42_RS28550 (146090) 146090..146947 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
LSG42_RS28555 (146944) 146944..147801 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
LSG42_RS28560 (147798) 147798..148625 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
LSG42_RS28565 (148625) 148625..149539 - 915 WP_072644633.1 Putative metal ABC transporter substrate-binding protein Hpf VF
LSG42_RS28570 (149895) 149895..150592 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
LSG42_RS28575 (150772) 150772..151285 - 514 Protein_172 DUF4113 domain-containing protein -
LSG42_RS28580 (151346) 151346..151450 - 105 Protein_173 AAA family ATPase -
LSG42_RS28585 (151452) 151452..151775 - 324 Protein_174 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance