MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP088142 Location: 987808..987984 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Accession: NZ_CP088142 Location: 987808..987984 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM93_RS04700 (984346) | 984346..984744 | + | 399 | Protein_920 | cytoplasmic protein | - |
| LRM93_RS04705 (985330) | 985330..985998 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| LRM93_RS04710 (986025) | 986025..986519 | + | 495 | WP_000424949.1 | hypothetical protein | - |
| LRM93_RS04715 (986764) | 986764..987420 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| LRM93_RS04720 (987779) | 987779..987984 | + | 206 | Protein_924 | IS5 family transposase ISEcl3 | Transposase |
| LRM93_RS04725 (988057) | 988057..988584 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LRM93_RS04730 (988581) | 988581..988871 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LRM93_RS04735 (989141) | 989141..989330 | - | 190 | Protein_927 | IS3 family transposase | - |
| LRM93_RS04740 (989734) | 989734..990177 | - | 444 | WP_000715088.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| LRM93_RS04745 (990633) | 990633..991283 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| LRM93_RS04750 (991280) | 991280..992968 | + | 1689 | WP_115367772.1 | type III secretion system outer membrane ring protein InvG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0.007 |