MGE detailed information
MGE type: IS/Tn MGE length: 279 bp
Accession: NZ_CP088142 Location: 3577607..3577885 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Accession: NZ_CP088142 Location: 3577607..3577885 Organism: Salmonella enterica subsp. enterica serovar Gallinarum strain SCPM-O-B-4548 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM93_RS17525 () | 3572993..3575502 | - | 2510 | Protein_3432 | fimbrial biogenesis outer membrane usher protein | - |
| LRM93_RS17530 () | 3575526..3576263 | - | 738 | WP_001676318.1 | pili assembly chaperone SafB | - |
| LRM93_RS17535 () | 3576347..3576844 | - | 498 | WP_016695185.1 | Saf-pilin pilus formation protein | - |
| LRM93_RS17540 () | 3577607..3578177 | - | 571 | Protein_3435 | integrase core domain-containing protein | - |
| LRM93_RS17545 () | 3578098..3578307 | - | 210 | WP_001676010.1 | hypothetical protein | - |
| LRM93_RS17550 () | 3578360..3578674 | + | 315 | WP_072100769.1 | SymE family type I addiction module toxin | - |
| LRM93_RS17555 () | 3578741..3579019 | - | 279 | WP_012543321.1 | hypothetical protein | - |
| LRM93_RS17560 () | 3579336..3579803 | - | 468 | WP_000828182.1 | sugar tyrosine-protein kinase | - |
| LRM93_RS17565 () | 3579800..3580117 | - | 318 | WP_001751277.1 | hypothetical protein | - |
| LRM93_RS17570 () | 3580675..3580908 | - | 234 | WP_124084119.1 | hypothetical protein | - |
| - | 3581086..3581418 | - | 333 | - | - | Antitoxin Detail |
| LRM93_RS17575 () | 3581243..3581500 | + | 258 | WP_000994230.1 | SymE family type I addiction module toxin | Toxin Detail |
| LRM93_RS17580 () | 3581566..3582012 | - | 447 | WP_000171102.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA10105 | NC_003197 | 341179..341460 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA10103 | NC_016810 | 340656..340937 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26042 | NC_016856 | 341863..342144 | 0.009 |