MGE detailed information
MGE type: Prophage MGE length: 38310 bp
Accession: NZ_CP088138 Location: 2112541..2150850 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Accession: NZ_CP088138 Location: 2112541..2150850 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM92_RS10285 () | 2108814..2109455 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LRM92_RS10290 () | 2109555..2110733 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LRM92_RS10295 () | 2110864..2111154 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LRM92_RS10300 () | 2111222..2111575 | + | 354 | WP_001042119.1 | protein YebF | - |
| LRM92_RS10305 () | 2111669..2112328 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LRM92_RS10310 () | 2112541..2114592 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| LRM92_RS10315 () | 2114627..2115325 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| LRM92_RS10320 () | 2115349..2116005 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| LRM92_RS10325 () | 2116113..2116343 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LRM92_RS10330 () | 2116481..2116855 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LRM92_RS10335 () | 2116856..2117731 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| LRM92_RS10340 () | 2117748..2118101 | + | 354 | WP_000722364.1 | YebY family protein | - |
| - | 2118201..2118346 | - | 146 | - | - | Antitoxin Detail |
| - | 2118241..2118344 | + | 104 | - | - | Toxin Detail |
| LRM92_RS10345 () | 2118475..2119398 | - | 924 | Protein_2027 | hypothetical protein ; Integrase | Integrase |
| LRM92_RS10350 () | 2119662..2120123 | - | 462 | Protein_2028 | DNA breaking-rejoining protein | - |
| LRM92_RS10355 () | 2120112..2120303 | + | 192 | Protein_2029 | glycoside hydrolase family 19 protein | - |
| LRM92_RS10360 () | 2120357..2120890 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| LRM92_RS10365 () | 2121147..2121314 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LRM92_RS10370 () | 2121379..2121567 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| LRM92_RS10375 () | 2121622..2121882 | + | 261 | Protein_2033 | DUF1441 family protein | - |
| LRM92_RS10380 () | 2122097..2122441 | + | 345 | Protein_2034 | macro domain-containing protein | - |
| LRM92_RS10385 () | 2122451..2122921 | + | 471 | Protein_2035 | tail fiber assembly protein | - |
| LRM92_RS10390 () | 2123018..2123218 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| LRM92_RS10395 () | 2123608..2123788 | - | 181 | Protein_2037 | IS3 family transposase | - |
| LRM92_RS10400 () | 2123788..2123913 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| LRM92_RS24765 () | 2124427..2124573 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| LRM92_RS10405 () | 2124567..2124734 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| LRM92_RS10410 () | 2125061..2125675 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| LRM92_RS10415 () | 2125685..2125843 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LRM92_RS10420 () | 2125976..2126890 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| LRM92_RS10425 () | 2128194..2128616 | - | 423 | Protein_2044 | hypothetical protein ; Integrase | Integrase |
| LRM92_RS10430 () | 2128686..2129880 | + | 1195 | Protein_2045 | IS256 family transposase IS285 | Transposase |
| LRM92_RS10435 () | 2130026..2130166 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| LRM92_RS10440 () | 2130332..2130601 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| LRM92_RS10445 () | 2130971..2131390 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| LRM92_RS10450 () | 2131778..2132254 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LRM92_RS10455 () | 2132584..2132979 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LRM92_RS10460 () | 2133663..2134385 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LRM92_RS10465 () | 2134670..2134834 | + | 165 | WP_001134856.1 | membrane protein | - |
| LRM92_RS10470 () | 2135058..2135708 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| LRM92_RS10475 () | 2135727..2135918 | - | 192 | WP_000457836.1 | YebW family protein | - |
| LRM92_RS10480 () | 2136029..2136265 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LRM92_RS10485 () | 2136383..2137822 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LRM92_RS10490 () | 2137900..2140533 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| LRM92_RS10495 () | 2140502..2141785 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LRM92_RS10500 () | 2141914..2142411 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LRM92_RS10505 () | 2142509..2143195 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LRM92_RS10510 () | 2143215..2145263 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LRM92_RS10515 () | 2145457..2146338 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LRM92_RS10520 () | 2146386..2147759 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| LRM92_RS10525 () | 2147935..2148726 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LRM92_RS10530 () | 2148938..2149177 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LRM92_RS10535 () | 2149335..2149478 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LRM92_RS10540 () | 2149549..2149836 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LRM92_RS10545 () | 2150485..2150628 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LRM92_RS10550 () | 2150641..2150850 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LRM92_RS10555 () | 2151070..2152815 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LRM92_RS10560 () | 2152881..2153690 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LRM92_RS10565 () | 2153687..2154253 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LRM92_RS10570 () | 2154663..2155121 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |