MGE detailed information
MGE type: Prophage MGE length: 59976 bp
Accession: NZ_CP087593 Location: 2094577..2154552 Organism: Staphylococcus aureus strain Newman NM-CQ Replicon: chromosome
Accession: NZ_CP087593 Location: 2094577..2154552 Organism: Staphylococcus aureus strain Newman NM-CQ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO764_RS10560 (2090750) | 2090750..2092805 | - | 2056 | Protein_2046 | extracellular adherence protein Eap/Map | - |
| LO764_RS10565 (2093194) | 2093194..2093391 | + | 198 | WP_000239610.1 | phospholipase | - |
| LO764_RS10570 (2093774) | 2093774..2093953 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| LO764_RS10575 (2094264) | 2094264..2094524 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| LO764_RS10580 (2094577) | 2094577..2094927 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| LO764_RS10585 (2095612) | 2095612..2096061 | + | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| LO764_RS10590 (2096156) | 2096156..2096491 | - | 336 | Protein_2052 | SH3 domain-containing protein | - |
| LO764_RS10595 (2097141) | 2097141..2097632 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
| LO764_RS10600 (2097823) | 2097823..2098578 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| LO764_RS10605 (2098590) | 2098590..2098844 | - | 255 | WP_000611512.1 | phage holin | - |
| LO764_RS10610 (2098896) | 2098896..2099003 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - (2098925) | 2098925..2099064 | + | 140 | NuclAT_0 | - | - |
| - (2098925) | 2098925..2099064 | + | 140 | NuclAT_0 | - | - |
| - (2098925) | 2098925..2099064 | + | 140 | NuclAT_0 | - | - |
| - (2098925) | 2098925..2099064 | + | 140 | NuclAT_0 | - | - |
| LO764_RS10615 (2099056) | 2099056..2099232 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| LO764_RS10620 (2099341) | 2099341..2100114 | - | 774 | WP_000750406.1 | Enterotoxin type A | VF |
| LO764_RS10625 (2100535) | 2100535..2100909 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| LO764_RS10630 (2100965) | 2100965..2101252 | - | 288 | WP_001040259.1 | hypothetical protein | - |
| LO764_RS10635 (2101299) | 2101299..2101451 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| LO764_RS10640 (2101441) | 2101441..2105226 | - | 3786 | WP_000582190.1 | phage tail spike protein | - |
| LO764_RS10645 (2105242) | 2105242..2106726 | - | 1485 | WP_000567413.1 | phage tail family protein | - |
| LO764_RS10650 (2106723) | 2106723..2111252 | - | 4530 | WP_001643732.1 | phage tail tape measure protein | - |
| LO764_RS14670 (2111309) | 2111309..2111443 | - | 135 | WP_000364140.1 | hypothetical protein | - |
| LO764_RS10655 (2111497) | 2111497..2111847 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| LO764_RS10660 (2111897) | 2111897..2112127 | - | 231 | Protein_2067 | Ig-like domain-containing protein | - |
| LO764_RS10665 (2112163) | 2112163..2112807 | - | 645 | WP_000268735.1 | phage tail protein | - |
| LO764_RS10670 (2112808) | 2112808..2113215 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| LO764_RS10675 (2113212) | 2113212..2113616 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| LO764_RS10680 (2113613) | 2113613..2113975 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| LO764_RS10685 (2113959) | 2113959..2114243 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| LO764_RS10690 (2114233) | 2114233..2114517 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| LO764_RS10695 (2114537) | 2114537..2115682 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| LO764_RS10700 (2115706) | 2115706..2116443 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| LO764_RS10705 (2116427) | 2116427..2117614 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| LO764_RS10710 (2117630) | 2117630..2119291 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| LO764_RS10715 (2119288) | 2119288..2119632 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| LO764_RS10720 (2119762) | 2119762..2120061 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| LO764_RS10725 (2120293) | 2120293..2120709 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| LO764_RS10730 (2120737) | 2120737..2120937 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| LO764_RS10735 (2120937) | 2120937..2121086 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| LO764_RS10740 (2121083) | 2121083..2121469 | - | 387 | WP_000592210.1 | hypothetical protein | - |
| LO764_RS10745 (2121466) | 2121466..2121672 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| LO764_RS10750 (2121709) | 2121709..2122251 | - | 543 | WP_000185659.1 | dUTP pyrophosphatase | - |
| LO764_RS10755 (2122244) | 2122244..2122426 | - | 183 | WP_000028422.1 | hypothetical protein | Antitoxin Detail |
| LO764_RS10760 (2122416) | 2122416..2122667 | - | 252 | WP_001065091.1 | DUF1024 family protein | Toxin Detail |
| LO764_RS10765 (2122660) | 2122660..2122827 | - | 168 | WP_001624242.1 | hypothetical protein | - |
| LO764_RS10770 (2122839) | 2122839..2123081 | - | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| LO764_RS10775 (2123085) | 2123085..2123453 | - | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| LO764_RS10780 (2123466) | 2123466..2123870 | - | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LO764_RS10785 (2123879) | 2123879..2124097 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| LO764_RS10790 (2124104) | 2124104..2124988 | - | 885 | WP_000148316.1 | DnaD domain protein | - |
| LO764_RS10795 (2125018) | 2125018..2125488 | - | 471 | WP_000934764.1 | single-stranded DNA-binding protein | - |
| LO764_RS10800 (2125489) | 2125489..2126106 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| LO764_RS10805 (2126187) | 2126187..2127107 | - | 921 | WP_000138472.1 | recombinase RecT | - |
| LO764_RS10810 (2127109) | 2127109..2129052 | - | 1944 | WP_000700577.1 | AAA family ATPase | - |
| LO764_RS10815 (2129061) | 2129061..2129324 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| LO764_RS10820 (2129333) | 2129333..2129593 | - | 261 | WP_000291503.1 | DUF1108 family protein | - |
| LO764_RS10825 (2129574) | 2129574..2129900 | - | 327 | WP_000165362.1 | DUF2482 family protein | - |
| LO764_RS10830 (2129995) | 2129995..2130156 | - | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| LO764_RS10835 (2130153) | 2130153..2130473 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| LO764_RS10840 (2130532) | 2130532..2131164 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| LO764_RS10845 (2131179) | 2131179..2131319 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| LO764_RS10850 (2131350) | 2131350..2131547 | - | 198 | WP_001148855.1 | hypothetical protein | - |
| LO764_RS10855 (2131563) | 2131563..2132315 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| LO764_RS10860 (2132366) | 2132366..2132695 | + | 330 | WP_000128907.1 | hypothetical protein | - |
| LO764_RS10865 (2132684) | 2132684..2132899 | - | 216 | WP_001025874.1 | DUF2829 domain-containing protein | - |
| LO764_RS10870 (2132915) | 2132915..2133178 | - | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| LO764_RS10875 (2133175) | 2133175..2133348 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| LO764_RS10880 (2133311) | 2133311..2134024 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| LO764_RS10885 (2134040) | 2134040..2134972 | + | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| LO764_RS10890 (2134978) | 2134978..2135319 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| LO764_RS10895 (2135523) | 2135523..2135705 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| LO764_RS10900 (2135805) | 2135805..2136269 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| LO764_RS10905 (2136328) | 2136328..2137365 | + | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LO764_RS10910 (2137419) | 2137419..2138246 | + | 828 | Protein_2117 | Phospholipase C | VF |
| LO764_RS10915 (2138484) | 2138484..2139500 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| LO764_RS10920 (2139522) | 2139522..2140577 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| LO764_RS10925 (2141012) | 2141012..2142235 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| LO764_RS10930 (2142607) | 2142607..2143452 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| LO764_RS10935 (2143514) | 2143514..2144425 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| LO764_RS10940 (2144565) | 2144565..2145893 | + | 1329 | WP_108630811.1 | TrkH family potassium uptake protein | - |
| LO764_RS10945 (2146746) | 2146746..2147189 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| LO764_RS10950 (2147295) | 2147295..2147732 | - | 438 | WP_011447041.1 | hypothetical protein | - |
| LO764_RS10955 (2148050) | 2148050..2148640 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| LO764_RS10960 (2148637) | 2148637..2148849 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| LO764_RS10965 (2148910) | 2148910..2149456 | + | 547 | Protein_2128 | site-specific integrase | - |
| LO764_RS10970 (2149551) | 2149551..2151167 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| LO764_RS10975 (2151243) | 2151243..2151527 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| LO764_RS10980 (2151702) | 2151702..2152445 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| LO764_RS10985 (2152470) | 2152470..2153729 | - | 1260 | WP_000120305.1 | hypothetical protein | VF |
| LO764_RS10990 (2153926) | 2153926..2154552 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| LO764_RS10995 (2154913) | 2154913..2155698 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| LO764_RS14675 (2156295) | 2156295..2156429 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| LO764_RS11005 (2156665) | 2156665..2157234 | + | 570 | WP_001105707.1 | accessory gene regulator AgrB | - |
| LO764_RS11010 (2157231) | 2157231..2157371 | + | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| LO764_RS11015 (2157396) | 2157396..2158688 | + | 1293 | WP_001554031.1 | GHKL domain-containing protein | - |
| LO764_RS11020 (2158707) | 2158707..2159423 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA22266, TA22270 | NC_009641 | 2089433..2146383 | 0.001 |