MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP086118 Location: 1027780..1027956 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Replicon: chromosome
Accession: NZ_CP086118 Location: 1027780..1027956 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLY43_RS04920 (1022893) | 1022893..1023273 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| LLY43_RS04925 (1023329) | 1023329..1025896 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| LLY43_RS04930 (1026055) | 1026055..1026576 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| LLY43_RS04935 (1026748) | 1026748..1027404 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| LLY43_RS04940 (1027751) | 1027751..1027956 | + | 206 | Protein_970 | IS5/IS1182 family transposase | - |
| LLY43_RS04945 (1028029) | 1028029..1028556 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LLY43_RS04950 (1028553) | 1028553..1028843 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LLY43_RS04955 (1029113) | 1029113..1029291 | - | 179 | Protein_973 | IS3 family transposase | - |
| LLY43_RS04960 (1029532) | 1029532..1029858 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| LLY43_RS04965 (1030131) | 1030131..1030478 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| LLY43_RS04970 (1030463) | 1030463..1030912 | - | 450 | WP_000381610.1 | membrane protein | - |
| LLY43_RS04975 (1031343) | 1031343..1031786 | - | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| LLY43_RS04980 (1032243) | 1032243..1032893 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |