MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP085987 Location: 4188239..4188415 Organism: Salmonella enterica strain SZL 38 Replicon: chromosome
Accession: NZ_CP085987 Location: 4188239..4188415 Organism: Salmonella enterica strain SZL 38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKX03_RS21115 (4183302) | 4183302..4183952 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| LKX03_RS21120 (4184409) | 4184409..4184852 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| LKX03_RS21125 (4185283) | 4185283..4185732 | + | 450 | WP_000381610.1 | membrane protein | - |
| LKX03_RS21130 (4185717) | 4185717..4186064 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| LKX03_RS21135 (4186337) | 4186337..4186663 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| LKX03_RS21140 (4186904) | 4186904..4187082 | + | 179 | Protein_4040 | IS3 family transposase | - |
| LKX03_RS21145 (4187352) | 4187352..4187642 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LKX03_RS21150 (4187639) | 4187639..4188166 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LKX03_RS21155 (4188239) | 4188239..4188444 | - | 206 | Protein_4043 | IS5 family transposase ISEcl3 | Transposase |
| LKX03_RS21160 (4188791) | 4188791..4189447 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| LKX03_RS21165 (4189619) | 4189619..4190140 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| LKX03_RS21170 (4190299) | 4190299..4192866 | + | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| LKX03_RS21175 (4192922) | 4192922..4193302 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |