MGE detailed information
MGE type: Conjugative plasmid MGE length: 128175 bp
Accession: NZ_CP083498 Location: 1..128175 Organism: Escherichia coli strain elppa6 Replicon: plasmid unnamed1
Accession: NZ_CP083498 Location: 1..128175 Organism: Escherichia coli strain elppa6 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U09_RS22670 (17) | 17..779 | + | 763 | Protein_1 | plasmid SOS inhibition protein A | - |
| - (748) | 748..946 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (748) | 748..946 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (748) | 748..946 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (748) | 748..946 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| K9U09_RS22675 (953) | 953..1102 | + | 150 | Protein_2 | DUF5431 family protein | - |
| K9U09_RS22680 (1044) | 1044..1169 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K9U09_RS22685 (1470) | 1470..1766 | - | 297 | Protein_4 | hypothetical protein | - |
| K9U09_RS22690 (1836) | 1836..2042 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| K9U09_RS22695 (2067) | 2067..2354 | + | 288 | WP_000107546.1 | hypothetical protein | - |
| K9U09_RS22700 (2473) | 2473..3294 | + | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
| K9U09_RS22705 (3591) | 3591..4181 | - | 591 | WP_166494936.1 | hypothetical protein | VF |
| K9U09_RS22710 (4533) | 4533..4916 | + | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K9U09_RS22715 (5108) | 5108..5755 | + | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| K9U09_RS22720 (5891) | 5891..6106 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| K9U09_RS22725 (6149) | 6149..6514 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| K9U09_RS22730 (6529) | 6529..6840 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K9U09_RS22735 (6862) | 6862..7428 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| K9U09_RS22740 (7415) | 7415..8143 | + | 729 | WP_001230813.1 | type-F conjugative transfer system secretin TraK | - |
| K9U09_RS22745 (8143) | 8143..9570 | + | 1428 | WP_000146676.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K9U09_RS22750 (9560) | 9560..10150 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K9U09_RS22755 (10137) | 10137..10334 | + | 198 | WP_024179215.1 | conjugal transfer protein TrbD | - |
| K9U09_RS22760 (10346) | 10346..10597 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| K9U09_RS22765 (10594) | 10594..11109 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K9U09_RS22770 (11244) | 11244..11465 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| K9U09_RS22775 (11625) | 11625..14252 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| K9U09_RS22780 (14249) | 14249..14635 | + | 387 | WP_000099691.1 | type-F conjugative transfer system protein TrbI | - |
| K9U09_RS22785 (14632) | 14632..15264 | + | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| K9U09_RS22790 (15261) | 15261..16253 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| K9U09_RS22795 (16262) | 16262..16900 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K9U09_RS22800 (16897) | 16897..18705 | + | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K9U09_RS22805 (18732) | 18732..18989 | + | 258 | WP_143359246.1 | conjugal transfer protein TrbE | - |
| K9U09_RS22810 (18982) | 18982..19194 | + | 213 | Protein_29 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K9U09_RS22820 (19963) | 19963..20502 | + | 540 | Protein_31 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K9U09_RS22825 (20518) | 20518..20865 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| K9U09_RS22830 (20867) | 20867..21181 | - | 315 | WP_001324103.1 | hypothetical protein | - |
| K9U09_RS22835 (21262) | 21262..21546 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K9U09_RS22840 (21533) | 21533..22078 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K9U09_RS22845 (22008) | 22008..22349 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| K9U09_RS22850 (22336) | 22336..22716 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| K9U09_RS22855 (22716) | 22716..24089 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| K9U09_RS22860 (24086) | 24086..26908 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K9U09_RS22865 (26924) | 26924..27421 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
| K9U09_RS22870 (27453) | 27453..28184 | + | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| K9U09_RS22875 (28437) | 28437..30590 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| K9U09_RS22880 (30599) | 30599..30997 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K9U09_RS22885 (30997) | 30997..31224 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| K9U09_RS22890 (31306) | 31306..36576 | + | 5271 | WP_000986963.1 | Multifunctional conjugation protein TraI | Relaxase |
| K9U09_RS22895 (36596) | 36596..37342 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| K9U09_RS22900 (37401) | 37401..38261 | + | 861 | WP_000704513.1 | putative protein YcjY | VF |
| K9U09_RS22905 (38364) | 38364..38924 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| K9U09_RS22910 (39060) | 39060..39272 | + | 213 | Protein_49 | hypothetical protein | - |
| K9U09_RS22915 (39518) | 39518..39592 | + | 75 | Protein_50 | endonuclease | - |
| - (39848) | 39848..39909 | - | 62 | NuclAT_1 | - | - |
| - (39848) | 39848..39909 | - | 62 | NuclAT_1 | - | - |
| - (39848) | 39848..39909 | - | 62 | NuclAT_1 | - | - |
| - (39848) | 39848..39909 | - | 62 | NuclAT_1 | - | - |
| K9U09_RS22920 (39953) | 39953..40102 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| K9U09_RS22925 (40386) | 40386..40643 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| K9U09_RS22930 (40660) | 40660..40911 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| K9U09_RS22935 (40902) | 40902..40949 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| K9U09_RS22940 (40942) | 40942..41424 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| K9U09_RS22945 (41417) | 41417..42274 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| K9U09_RS22950 (43213) | 43213..43866 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| K9U09_RS22955 (43959) | 43959..44216 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| K9U09_RS22960 (44149) | 44149..44550 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| K9U09_RS22965 (44835) | 44835..46145 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| K9U09_RS22970 (46174) | 46174..46272 | + | 99 | Protein_61 | IS1 family transposase | - |
| K9U09_RS22975 (46422) | 46422..47282 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| K9U09_RS22980 (47581) | 47581..48285 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K9U09_RS22985 (48338) | 48338..48844 | + | 507 | Protein_64 | transposase | - |
| K9U09_RS22990 (48853) | 48853..49713 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| K9U09_RS22995 (49745) | 49745..50944 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| K9U09_RS23000 (51050) | 51050..51676 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| K9U09_RS23005 (51708) | 51708..51944 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| K9U09_RS23010 (51998) | 51998..52834 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| K9U09_RS23015 (52834) | 52834..53637 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| K9U09_RS23020 (53698) | 53698..54513 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| K9U09_RS23025 (54821) | 54821..54997 | - | 177 | Protein_72 | replication protein C, IncQ-type | - |
| K9U09_RS23030 (55058) | 55058..55762 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K9U09_RS23035 (55884) | 55884..56789 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| K9U09_RS23040 (56786) | 56786..58024 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| K9U09_RS23045 (58024) | 58024..58608 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| K9U09_RS23050 (59101) | 59101..59865 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K9U09_RS23055 (59983) | 59983..60048 | - | 66 | Protein_78 | EAL domain-containing protein | - |
| K9U09_RS23060 (60092) | 60092..60397 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| K9U09_RS23065 (60408) | 60408..61613 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| K9U09_RS23070 (61769) | 61769..61972 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| K9U09_RS23075 (62100) | 62100..62939 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| K9U09_RS23080 (62933) | 62933..63280 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| K9U09_RS23085 (63486) | 63486..64274 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| K9U09_RS23090 (64405) | 64405..64878 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| K9U09_RS23095 (65036) | 65036..65785 | + | 750 | Protein_86 | IS91 family transposase ISAzo26 | Transposase |
| K9U09_RS23100 (65844) | 65844..66548 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K9U09_RS23105 (66600) | 66600..66818 | + | 219 | Protein_88 | putative protein YncE | VF |
| K9U09_RS23110 (67341) | 67341..67646 | - | 306 | Protein_89 | IS91 family transposase ISSbo1 | Transposase |
| K9U09_RS23115 (67672) | 67672..68411 | + | 740 | Protein_90 | IS3 family transposase IS629 | Transposase |
| K9U09_RS23120 (69084) | 69084..70592 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| K9U09_RS23125 (70676) | 70676..71014 | + | 339 | Protein_92 | IS3 family transposase IS629 | Transposase |
| K9U09_RS23130 (71094) | 71094..71498 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| K9U09_RS23135 (71495) | 71495..71842 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| K9U09_RS23140 (71891) | 71891..72836 | + | 946 | Protein_95 | IS66 family transposase ISEc8 | Transposase |
| K9U09_RS23145 (72922) | 72922..73944 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| K9U09_RS23150 (73941) | 73941..74723 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| K9U09_RS23155 (74791) | 74791..75399 | + | 609 | Protein_98 | IS66 family transposase ISEc22 | Transposase |
| K9U09_RS23160 (75462) | 75462..76253 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| K9U09_RS23165 (76260) | 76260..78230 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| K9U09_RS23170 (78512) | 78512..78936 | + | 425 | Protein_101 | IS3 family transposase IS2 | Transposase |
| K9U09_RS23175 (79473) | 79473..79745 | + | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| K9U09_RS23180 (80191) | 80191..80366 | + | 176 | Protein_103 | IS3 family transposase | - |
| K9U09_RS23185 (80592) | 80592..81761 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| K9U09_RS23190 (82128) | 82128..82316 | + | 189 | WP_046952519.1 | hypothetical protein | - |
| K9U09_RS23195 (82437) | 82437..83177 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| K9U09_RS23200 (83462) | 83462..84439 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| K9U09_RS23205 (85185) | 85185..85508 | + | 324 | Protein_108 | IS21 family transposase IS21 | Transposase |
| K9U09_RS23210 (85510) | 85510..85614 | + | 105 | Protein_109 | AAA family ATPase | - |
| K9U09_RS23215 (85675) | 85675..86188 | + | 514 | Protein_110 | DUF4113 domain-containing protein | - |
| K9U09_RS23225 (87421) | 87421..88335 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| K9U09_RS23230 (88335) | 88335..89162 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| K9U09_RS23235 (89159) | 89159..90016 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| K9U09_RS23240 (90013) | 90013..90870 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| K9U09_RS23245 (91104) | 91104..91361 | - | 258 | Protein_116 | Tn3 family transposase | - |
| K9U09_RS23250 (91359) | 91359..91772 | + | 414 | Protein_117 | phosphopyruvate hydratase | - |
| K9U09_RS23255 (92113) | 92113..92493 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| K9U09_RS23260 (92873) | 92873..94066 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| K9U09_RS23265 (94202) | 94202..95926 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| K9U09_RS23270 (95927) | 95927..96874 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| K9U09_RS23275 (96874) | 96874..98616 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| K9U09_RS23280 (98613) | 98613..99946 | + | 1334 | Protein_123 | L-lysine N6-monooxygenase | VF |
| K9U09_RS23285 (99972) | 99972..102173 | + | 2202 | WP_109552179.1 | Ferric aerobactin receptor | VF |
| K9U09_RS23290 (102553) | 102553..103247 | + | 695 | WP_228596859.1 | IS1 family transposase IS1S | Transposase |
| K9U09_RS23295 (103501) | 103501..104523 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| K9U09_RS23300 (104508) | 104508..106073 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| K9U09_RS23305 (106148) | 106148..106564 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K9U09_RS23310 (106561) | 106561..106791 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K9U09_RS23315 (107172) | 107172..110966 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| K9U09_RS23320 (111011) | 111011..111427 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K9U09_RS23325 (111424) | 111424..111654 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K9U09_RS23330 (111919) | 111919..112311 | + | 393 | WP_228596861.1 | HEPN family nuclease | - |
| K9U09_RS23335 (112601) | 112601..112819 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| K9U09_RS23340 (112821) | 112821..113126 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| K9U09_RS23345 (113127) | 113127..113933 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| K9U09_RS23350 (114689) | 114689..115444 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| K9U09_RS23355 (116032) | 116032..117198 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| K9U09_RS23360 (117198) | 117198..118169 | + | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| K9U09_RS23365 (119079) | 119079..119981 | + | 903 | WP_228596863.1 | DUF1281 domain-containing protein | - |
| K9U09_RS23370 (119985) | 119985..120290 | + | 306 | WP_135564237.1 | hypothetical protein | - |
| K9U09_RS23375 (120367) | 120367..121050 | + | 684 | WP_000085939.1 | DNA methylase | - |
| K9U09_RS23380 (121051) | 121051..121272 | + | 222 | WP_001104870.1 | hypothetical protein | - |
| K9U09_RS23385 (121166) | 121166..121720 | + | 555 | WP_077248347.1 | DUF1380 family protein | - |
| K9U09_RS23390 (121766) | 121766..122542 | + | 777 | WP_001005035.1 | hypothetical protein | - |
| K9U09_RS23395 (122957) | 122957..123382 | + | 426 | WP_001198918.1 | antirestriction protein | - |
| K9U09_RS23400 (123429) | 123429..123851 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| K9U09_RS23405 (123848) | 123848..124039 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| K9U09_RS23410 (124263) | 124263..124517 | - | 255 | Protein_149 | hypothetical protein | - |
| K9U09_RS23415 (124835) | 124835..125374 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| K9U09_RS23420 (125432) | 125432..125665 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| K9U09_RS23425 (125731) | 125731..127689 | + | 1959 | WP_029487628.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|