NZ_CP0834791..149801

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 149801 bp
Accession: NZ_CP083479        Location: 1..149801         Organism: Escherichia coli strain elppa10       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K9U13_RS23180 (72) 72..473 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
K9U13_RS23185 (869) 869..1303 - 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
K9U13_RS23190 (1375) 1375..1464 + 90 Protein_3 mercuric transporter MerT family protein -
K9U13_RS23195 (1498) 1498..4497 - 3000 WP_072834372.1 Tn3 family transposase TnpA_Tn3 Transposase
K9U13_RS23200 (4556) 4556..5260 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
K9U13_RS23205 (5309) 5309..6214 - 906 Protein_6 IS4 family transposase IS10R Transposase
K9U13_RS23210 (6324) 6324..7286 - 963 Protein_7 IS4 family transposase IS10R Transposase
K9U13_RS23215 (7429) 7429..8289 + 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
K9U13_RS23220 (8302) 8302..8844 + 543 WP_000587837.1 AAA family ATPase -
K9U13_RS23225 (9326) 9326..9517 - 192 WP_000951934.1 hypothetical protein -
K9U13_RS23230 (9541) 9541..9768 + 228 WP_000248278.1 hypothetical protein -
K9U13_RS23235 (9819) 9819..10946 + 1128 WP_014837927.1 DUF3883 domain-containing protein -
K9U13_RS23240 (10983) 10983..11687 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
K9U13_RS23245 (11900) 11900..12760 + 861 WP_000027057.1 Beta-lactamase TEM ARG
K9U13_RS23250 (12922) 12922..13737 + 816 WP_001043260.1 Dihydropteroate synthase ARG
K9U13_RS23255 (13798) 13798..14601 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
K9U13_RS23260 (14601) 14601..15437 + 837 WP_000480968.1 hypothetical protein ARG
K9U13_RS23265 (15743) 15743..15985 + 243 WP_000844627.1 transposase -
K9U13_RS23270 (16017) 16017..16667 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
K9U13_RS23275 (16773) 16773..17972 + 1200 WP_000804063.1 Tetracycline resistance protein, class C ARG
K9U13_RS23280 (17939) 17939..18127 - 189 Protein_21 IS91 family transposase -
K9U13_RS23285 (18239) 18239..18544 - 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
K9U13_RS23290 (18572) 18572..19786 - 1215 WP_000214121.1 Bicyclomycin resistance protein ARG
K9U13_RS23295 (20003) 20003..20887 - 885 WP_001447541.1 DUF3363 domain-containing protein -
K9U13_RS23300 (20918) 20918..22411 - 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
K9U13_RS23305 (22622) 22622..22846 - 225 WP_000743213.1 hypothetical protein -
K9U13_RS23310 (22843) 22843..23580 - 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
K9U13_RS23315 (24066) 24066..24206 - 141 WP_001044210.1 hypothetical protein -
K9U13_RS23320 (24212) 24212..24916 - 705 WP_001067834.1 IS6-like element IS26 family transposase -
K9U13_RS23325 (24978) 24978..25862 - 885 Protein_30 IS91 family transposase ISAzo26 Transposase
K9U13_RS23330 (26018) 26018..26491 + 474 WP_004201280.1 Dihydrofolate reductase type 1 ARG
K9U13_RS23335 (26561) 26561..27265 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
K9U13_RS23340 (27318) 27318..27749 - 432 Protein_33 Tn3 family transposase TnpR_TnAs3 Transposase
K9U13_RS23345 (27875) 27875..28225 - 351 WP_000454193.1 DUF3330 domain-containing protein -
K9U13_RS23350 (28428) 28428..29441 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
K9U13_RS23355 (29608) 29608..30450 + 843 WP_001456218.1 alpha/beta fold putative hydrolase EstX -
K9U13_RS23360 (30597) 30597..31154 + 558 WP_134894556.1 HAD family hydrolase -
K9U13_RS23365 (31385) 31385..32017 - 633 WP_020802982.1 IS256 family transposase IS406 Transposase
K9U13_RS23370 (32040) 32040..32315 + 276 WP_109023896.1 hypothetical protein -
K9U13_RS23375 (32318) 32318..33109 - 792 WP_000034420.1 Dihydropteroate synthase ARG
K9U13_RS23380 (33578) 33578..33823 - 246 WP_001354008.1 GrpB family protein -
K9U13_RS23385 (33861) 33861..34724 - 864 WP_000612791.1 SDR family oxidoreductase -
K9U13_RS23390 (34870) 34870..34938 - 69 Protein_43 macrolide transporter -
K9U13_RS23395 (34985) 34985..35689 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
K9U13_RS23400 (35840) 35840..36655 + 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
K9U13_RS23405 (36845) 36845..37129 - 285 Protein_46 IS6 family transposase IS26 Transposase
K9U13_RS23410 (37195) 37195..37899 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
K9U13_RS23415 (37952) 37952..38272 - 321 Protein_48 NAD(P)H-dependent oxidoreductase -
K9U13_RS23420 (38433) 38433..38756 - 324 WP_001175594.1 metalloregulator ArsR/SmtB family transcription factor -
K9U13_RS23425 (38861) 38861..39940 + 1080 WP_063117293.1 permease -
K9U13_RS23430 (40233) 40233..40850 - 618 WP_000521603.1 ProQ/FINO family protein -
K9U13_RS23435 (41041) 41041..42597 - 1557 WP_024126035.1 AAA family ATPase -
K9U13_RS23440 (42860) 42860..43450 - 591 WP_000194575.1 hypothetical protein -
K9U13_RS23445 (43450) 43450..43707 - 258 WP_000343085.1 hypothetical protein -
K9U13_RS23450 (44061) 44061..46199 + 2139 WP_000350635.1 AAA family ATPase -
K9U13_RS23455 (46361) 46361..46777 - 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K9U13_RS23460 (46774) 46774..47004 - 231 WP_001261287.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
K9U13_RS23465 (47312) 47312..48877 + 1566 WP_000741348.1 AAA family ATPase -
K9U13_RS23470 (48934) 48934..49803 - 870 WP_000253407.1 hypothetical protein -
K9U13_RS23475 (49805) 49805..50893 - 1089 WP_000952231.1 hypothetical protein -
K9U13_RS23480 (51191) 51191..52123 - 933 WP_000991830.1 S-4TM family putative pore-forming effector -
K9U13_RS23485 (52127) 52127..53122 - 996 WP_000246635.1 hypothetical protein -
K9U13_RS23490 (53561) 53561..54517 - 957 WP_000271276.1 Ferri-bacillibactin esterase BesA VF
K9U13_RS23495 (54602) 54602..55831 - 1230 WP_001552738.1 Enterochelin esterase VF
K9U13_RS23500 (55935) 55935..59594 - 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
K9U13_RS23505 (59734) 59734..60849 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
K9U13_RS23510 (62160) 62160..63183 - 1024 Protein_67 IS481 family transposase ISKpn28 Transposase
K9U13_RS23515 (63737) 63737..63936 + 200 Protein_68 lysis protein -
K9U13_RS23525 (63994) 63994..64287 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
K9U13_RS23530 (64914) 64914..66150 + 1237 Protein_70 IS3 family transposase IS2 Transposase
K9U13_RS23535 (67374) 67374..68567 + 1194 WP_000450494.1 GTP-binding protein -
K9U13_RS23540 (68745) 68745..68894 + 150 Protein_72 IS3 family transposase IS2 Transposase
K9U13_RS23545 (69424) 69424..70524 + 1101 WP_072714138.1 hypothetical protein -
K9U13_RS23550 (70514) 70514..70999 + 486 WP_001015823.1 hypothetical protein -
K9U13_RS23555 (71002) 71002..72828 + 1827 WP_228589215.1 AAA family ATPase -
K9U13_RS23560 (72969) 72969..73250 + 282 WP_072834405.1 hypothetical protein -
K9U13_RS23570 (74009) 74009..74299 - 291 Protein_78 IS3 family transposase IS1203 Transposase
K9U13_RS23575 (74438) 74438..74617 + 180 Protein_79 integrase core domain-containing protein -
K9U13_RS23580 (75914) 75914..76867 + 954 WP_000280980.1 Protease 7 VF
K9U13_RS23585 (77300) 77300..78409 + 1110 WP_000771475.1 SDR family oxidoreductase -
K9U13_RS23590 (78478) 78478..79380 + 903 WP_001312822.1 hypothetical protein VF
K9U13_RS23595 (79754) 79754..79942 + 189 WP_001312821.1 hypothetical protein -
K9U13_RS23600 (80063) 80063..80803 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
K9U13_RS23605 (81088) 81088..82065 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
K9U13_RS23610 (82811) 82811..83134 + 324 Protein_86 IS21 family transposase IS21 Transposase
K9U13_RS23615 (83136) 83136..83240 + 105 Protein_87 AAA family ATPase -
K9U13_RS23620 (83301) 83301..83814 + 514 Protein_88 DUF4113 domain-containing protein -
K9U13_RS23630 (85047) 85047..85961 + 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
K9U13_RS23635 (85961) 85961..86788 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
K9U13_RS23640 (86785) 86785..87642 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
K9U13_RS23645 (87639) 87639..88496 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
K9U13_RS23650 (88985) 88985..89398 + 414 Protein_94 phosphopyruvate hydratase -
K9U13_RS23655 (89739) 89739..90119 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
K9U13_RS23660 (90499) 90499..91692 - 1194 WP_000095526.1 MFS transporter -
K9U13_RS23665 (91828) 91828..93552 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
K9U13_RS23670 (93553) 93553..94500 + 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
K9U13_RS23675 (94500) 94500..96242 + 1743 WP_001015721.1 Aerobactin synthase VF
K9U13_RS23680 (96239) 96239..97572 + 1334 Protein_100 L-lysine N6-monooxygenase VF
K9U13_RS23685 (97598) 97598..99799 + 2202 WP_000973520.1 Ferric aerobactin receptor VF
K9U13_RS23690 (100284) 100284..100981 + 698 WP_094096600.1 IS1 family transposase IS1S Transposase
K9U13_RS23695 (101281) 101281..102447 + 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
K9U13_RS23700 (102447) 102447..103418 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
K9U13_RS23705 (104055) 104055..104224 + 170 Protein_105 hypothetical protein -
K9U13_RS23710 (104407) 104407..104487 - 81 Protein_106 hypothetical protein -
K9U13_RS23715 (104557) 104557..104763 + 207 WP_000275856.1 hypothetical protein -
K9U13_RS23720 (104789) 104789..105328 + 540 WP_000290840.1 single-stranded DNA-binding protein -
K9U13_RS23725 (105396) 105396..105629 + 234 WP_000005987.1 DUF905 family protein -
K9U13_RS23730 (105657) 105657..105854 + 198 Protein_110 hypothetical protein -
K9U13_RS23735 (105909) 105909..106343 + 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
K9U13_RS23740 (106340) 106340..107102 + 763 Protein_112 plasmid SOS inhibition protein A -
K9U13_RS23745 (107071) 107071..107259 - 189 WP_001299721.1 hypothetical protein -
- (107071) 107071..107295 + 225 NuclAT_0 - -
- (107071) 107071..107295 + 225 NuclAT_0 - -
- (107071) 107071..107295 + 225 NuclAT_0 - -
- (107071) 107071..107295 + 225 NuclAT_0 - -
K9U13_RS23750 (107281) 107281..107430 + 150 Protein_114 plasmid maintenance protein Mok -
K9U13_RS23755 (107381) 107381..107497 + 117 WP_001323520.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
K9U13_RS23760 (107717) 107717..107947 + 231 WP_071586998.1 hypothetical protein -
K9U13_RS23765 (107945) 107945..108117 - 173 Protein_117 hypothetical protein -
K9U13_RS23770 (108187) 108187..108393 + 207 WP_000547968.1 hypothetical protein -
K9U13_RS23775 (108418) 108418..108705 + 288 WP_000107535.1 hypothetical protein -
K9U13_RS23780 (108823) 108823..109644 + 822 WP_001234426.1 DUF932 domain-containing protein -
K9U13_RS23785 (109941) 109941..110543 - 603 WP_000243712.1 hypothetical protein VF
K9U13_RS23790 (110864) 110864..111247 + 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
K9U13_RS23795 (111434) 111434..112123 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
K9U13_RS23800 (112216) 112216..112617 + 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
K9U13_RS23805 (112650) 112650..113015 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
K9U13_RS23810 (113030) 113030..113341 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
K9U13_RS23815 (113363) 113363..113929 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
K9U13_RS23820 (113916) 113916..114644 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
K9U13_RS23825 (114644) 114644..116071 + 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
K9U13_RS23830 (116061) 116061..116651 + 591 WP_001376242.1 conjugal transfer pilus-stabilizing protein TraP -
K9U13_RS23835 (116638) 116638..116835 + 198 WP_001324648.1 conjugal transfer protein TrbD -
K9U13_RS23840 (116847) 116847..117098 + 252 WP_001038342.1 conjugal transfer protein TrbG -
K9U13_RS23845 (117095) 117095..117610 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
K9U13_RS23850 (117745) 117745..117966 + 222 WP_001278689.1 conjugal transfer protein TraR -
K9U13_RS23855 (118126) 118126..120753 + 2628 WP_001064245.1 type IV secretion system protein TraC -
K9U13_RS23860 (120750) 120750..121136 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
K9U13_RS23865 (121133) 121133..121765 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
K9U13_RS23870 (121762) 121762..122754 + 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
K9U13_RS23875 (122763) 122763..123401 + 639 WP_000777700.1 type-F conjugative transfer system pilin assembly protein TrbC -
K9U13_RS23880 (123398) 123398..125206 + 1809 WP_228589214.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
K9U13_RS23885 (125233) 125233..125490 + 258 WP_000864318.1 conjugal transfer protein TrbE -
K9U13_RS23890 (125483) 125483..126226 + 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
K9U13_RS23895 (126242) 126242..126589 + 348 WP_001287910.1 conjugal transfer protein TrbA -
K9U13_RS23900 (126591) 126591..126905 - 315 WP_001324103.1 hypothetical protein -
K9U13_RS23905 (126986) 126986..127270 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
K9U13_RS23910 (127257) 127257..127802 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
K9U13_RS23915 (127732) 127732..128073 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
K9U13_RS23920 (128060) 128060..128440 + 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
K9U13_RS23925 (128440) 128440..129813 + 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
K9U13_RS23930 (129810) 129810..132632 + 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
K9U13_RS23935 (132648) 132648..133145 + 498 WP_000605857.1 entry exclusion protein -
K9U13_RS23940 (133177) 133177..133908 + 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
K9U13_RS23945 (134161) 134161..136314 + 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
K9U13_RS23950 (136323) 136323..136721 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K9U13_RS23955 (136721) 136721..136948 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
K9U13_RS23960 (137030) 137030..142300 + 5271 WP_000986962.1 Multifunctional conjugation protein TraI Relaxase
K9U13_RS23965 (142320) 142320..143066 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
K9U13_RS23970 (143125) 143125..143985 + 861 WP_000704514.1 putative protein YcjY VF
K9U13_RS23975 (144088) 144088..144648 + 561 WP_000139315.1 fertility inhibition protein FinO -
K9U13_RS23980 (144784) 144784..144996 + 213 WP_001299730.1 ANR family transcriptional regulator -
K9U13_RS23985 (145242) 145242..145316 + 75 Protein_161 endonuclease -
- (145572) 145572..145633 - 62 NuclAT_1 - Antitoxin Detail
- (145572) 145572..145633 - 62 NuclAT_1 - Antitoxin Detail
- (145572) 145572..145633 - 62 NuclAT_1 - Antitoxin Detail
- (145572) 145572..145633 - 62 NuclAT_1 - Antitoxin Detail
K9U13_RS23990 (145677) 145677..145826 + 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
K9U13_RS23995 (146110) 146110..146367 + 258 WP_000083845.1 replication regulatory protein RepA -
K9U13_RS24000 (146384) 146384..146635 - 252 WP_223195197.1 replication protein RepA -
K9U13_RS24005 (146626) 146626..146673 + 48 WP_229471593.1 hypothetical protein -
K9U13_RS24010 (146666) 146666..147148 + 483 WP_001273588.1 hypothetical protein -
K9U13_RS24015 (147141) 147141..147998 + 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
K9U13_RS24020 (148937) 148937..149590 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance