MGE detailed information
MGE type: Conjugative plasmid MGE length: 149801 bp
Accession: NZ_CP083479 Location: 1..149801 Organism: Escherichia coli strain elppa10 Replicon: plasmid unnamed1
Accession: NZ_CP083479 Location: 1..149801 Organism: Escherichia coli strain elppa10 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U13_RS23180 () | 72..473 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| K9U13_RS23185 () | 869..1303 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| K9U13_RS23190 () | 1375..1464 | + | 90 | Protein_3 | mercuric transporter MerT family protein | - |
| K9U13_RS23195 () | 1498..4497 | - | 3000 | WP_072834372.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| K9U13_RS23200 () | 4556..5260 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| K9U13_RS23205 () | 5309..6214 | - | 906 | Protein_6 | IS4 family transposase IS10R | Transposase |
| K9U13_RS23210 () | 6324..7286 | - | 963 | Protein_7 | IS4 family transposase IS10R | Transposase |
| K9U13_RS23215 () | 7429..8289 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| K9U13_RS23220 () | 8302..8844 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| K9U13_RS23225 () | 9326..9517 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| K9U13_RS23230 () | 9541..9768 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| K9U13_RS23235 () | 9819..10946 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| K9U13_RS23240 () | 10983..11687 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K9U13_RS23245 () | 11900..12760 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| K9U13_RS23250 () | 12922..13737 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| K9U13_RS23255 () | 13798..14601 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| K9U13_RS23260 () | 14601..15437 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| K9U13_RS23265 () | 15743..15985 | + | 243 | WP_000844627.1 | transposase | - |
| K9U13_RS23270 () | 16017..16667 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| K9U13_RS23275 () | 16773..17972 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| K9U13_RS23280 () | 17939..18127 | - | 189 | Protein_21 | IS91 family transposase | - |
| K9U13_RS23285 () | 18239..18544 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| K9U13_RS23290 () | 18572..19786 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| K9U13_RS23295 () | 20003..20887 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| K9U13_RS23300 () | 20918..22411 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| K9U13_RS23305 () | 22622..22846 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| K9U13_RS23310 () | 22843..23580 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| K9U13_RS23315 () | 24066..24206 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| K9U13_RS23320 () | 24212..24916 | - | 705 | WP_001067834.1 | IS6-like element IS26 family transposase | - |
| K9U13_RS23325 () | 24978..25862 | - | 885 | Protein_30 | IS91 family transposase ISAzo26 | Transposase |
| K9U13_RS23330 () | 26018..26491 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| K9U13_RS23335 () | 26561..27265 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K9U13_RS23340 () | 27318..27749 | - | 432 | Protein_33 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| K9U13_RS23345 () | 27875..28225 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| K9U13_RS23350 () | 28428..29441 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| K9U13_RS23355 () | 29608..30450 | + | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| K9U13_RS23360 () | 30597..31154 | + | 558 | WP_134894556.1 | HAD family hydrolase | - |
| K9U13_RS23365 () | 31385..32017 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| K9U13_RS23370 () | 32040..32315 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| K9U13_RS23375 () | 32318..33109 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| K9U13_RS23380 () | 33578..33823 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| K9U13_RS23385 () | 33861..34724 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| K9U13_RS23390 () | 34870..34938 | - | 69 | Protein_43 | macrolide transporter | - |
| K9U13_RS23395 () | 34985..35689 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K9U13_RS23400 () | 35840..36655 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| K9U13_RS23405 () | 36845..37129 | - | 285 | Protein_46 | IS6 family transposase IS26 | Transposase |
| K9U13_RS23410 () | 37195..37899 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K9U13_RS23415 () | 37952..38272 | - | 321 | Protein_48 | NAD(P)H-dependent oxidoreductase | - |
| K9U13_RS23420 () | 38433..38756 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| K9U13_RS23425 () | 38861..39940 | + | 1080 | WP_063117293.1 | permease | - |
| K9U13_RS23430 () | 40233..40850 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| K9U13_RS23435 () | 41041..42597 | - | 1557 | WP_024126035.1 | AAA family ATPase | - |
| K9U13_RS23440 () | 42860..43450 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| K9U13_RS23445 () | 43450..43707 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| K9U13_RS23450 () | 44061..46199 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| K9U13_RS23455 () | 46361..46777 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K9U13_RS23460 () | 46774..47004 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K9U13_RS23465 () | 47312..48877 | + | 1566 | WP_000741348.1 | AAA family ATPase | - |
| K9U13_RS23470 () | 48934..49803 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| K9U13_RS23475 () | 49805..50893 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| K9U13_RS23480 () | 51191..52123 | - | 933 | WP_000991830.1 | S-4TM family putative pore-forming effector | - |
| K9U13_RS23485 () | 52127..53122 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| K9U13_RS23490 () | 53561..54517 | - | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| K9U13_RS23495 () | 54602..55831 | - | 1230 | WP_001552738.1 | Enterochelin esterase | VF |
| K9U13_RS23500 () | 55935..59594 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| K9U13_RS23505 () | 59734..60849 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| K9U13_RS23510 () | 62160..63183 | - | 1024 | Protein_67 | IS481 family transposase ISKpn28 | Transposase |
| K9U13_RS23515 () | 63737..63936 | + | 200 | Protein_68 | lysis protein | - |
| K9U13_RS23525 () | 63994..64287 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| K9U13_RS23530 () | 64914..66150 | + | 1237 | Protein_70 | IS3 family transposase IS2 | Transposase |
| K9U13_RS23535 () | 67374..68567 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| K9U13_RS23540 () | 68745..68894 | + | 150 | Protein_72 | IS3 family transposase IS2 | Transposase |
| K9U13_RS23545 () | 69424..70524 | + | 1101 | WP_072714138.1 | hypothetical protein | - |
| K9U13_RS23550 () | 70514..70999 | + | 486 | WP_001015823.1 | hypothetical protein | - |
| K9U13_RS23555 () | 71002..72828 | + | 1827 | WP_228589215.1 | AAA family ATPase | - |
| K9U13_RS23560 () | 72969..73250 | + | 282 | WP_072834405.1 | hypothetical protein | - |
| K9U13_RS23570 () | 74009..74299 | - | 291 | Protein_78 | IS3 family transposase IS1203 | Transposase |
| K9U13_RS23575 () | 74438..74617 | + | 180 | Protein_79 | integrase core domain-containing protein | - |
| K9U13_RS23580 () | 75914..76867 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| K9U13_RS23585 () | 77300..78409 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| K9U13_RS23590 () | 78478..79380 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| K9U13_RS23595 () | 79754..79942 | + | 189 | WP_001312821.1 | hypothetical protein | - |
| K9U13_RS23600 () | 80063..80803 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| K9U13_RS23605 () | 81088..82065 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| K9U13_RS23610 () | 82811..83134 | + | 324 | Protein_86 | IS21 family transposase IS21 | Transposase |
| K9U13_RS23615 () | 83136..83240 | + | 105 | Protein_87 | AAA family ATPase | - |
| K9U13_RS23620 () | 83301..83814 | + | 514 | Protein_88 | DUF4113 domain-containing protein | - |
| K9U13_RS23630 () | 85047..85961 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| K9U13_RS23635 () | 85961..86788 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| K9U13_RS23640 () | 86785..87642 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| K9U13_RS23645 () | 87639..88496 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| K9U13_RS23650 () | 88985..89398 | + | 414 | Protein_94 | phosphopyruvate hydratase | - |
| K9U13_RS23655 () | 89739..90119 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| K9U13_RS23660 () | 90499..91692 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| K9U13_RS23665 () | 91828..93552 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| K9U13_RS23670 () | 93553..94500 | + | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| K9U13_RS23675 () | 94500..96242 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| K9U13_RS23680 () | 96239..97572 | + | 1334 | Protein_100 | L-lysine N6-monooxygenase | VF |
| K9U13_RS23685 () | 97598..99799 | + | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| K9U13_RS23690 () | 100284..100981 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| K9U13_RS23695 () | 101281..102447 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| K9U13_RS23700 () | 102447..103418 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| K9U13_RS23705 () | 104055..104224 | + | 170 | Protein_105 | hypothetical protein | - |
| K9U13_RS23710 () | 104407..104487 | - | 81 | Protein_106 | hypothetical protein | - |
| K9U13_RS23715 () | 104557..104763 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| K9U13_RS23720 () | 104789..105328 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| K9U13_RS23725 () | 105396..105629 | + | 234 | WP_000005987.1 | DUF905 family protein | - |
| K9U13_RS23730 () | 105657..105854 | + | 198 | Protein_110 | hypothetical protein | - |
| K9U13_RS23735 () | 105909..106343 | + | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| K9U13_RS23740 () | 106340..107102 | + | 763 | Protein_112 | plasmid SOS inhibition protein A | - |
| K9U13_RS23745 () | 107071..107259 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 107071..107295 | + | 225 | NuclAT_0 | - | - |
| - () | 107071..107295 | + | 225 | NuclAT_0 | - | - |
| - () | 107071..107295 | + | 225 | NuclAT_0 | - | - |
| - () | 107071..107295 | + | 225 | NuclAT_0 | - | - |
| - | 107228..107293 | - | 66 | - | - | - |
| K9U13_RS23750 () | 107281..107430 | + | 150 | Protein_114 | plasmid maintenance protein Mok | - |
| K9U13_RS23755 () | 107381..107497 | + | 117 | WP_001323520.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K9U13_RS23760 () | 107717..107947 | + | 231 | WP_071586998.1 | hypothetical protein | - |
| K9U13_RS23765 () | 107945..108117 | - | 173 | Protein_117 | hypothetical protein | - |
| K9U13_RS23770 () | 108187..108393 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| K9U13_RS23775 () | 108418..108705 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| K9U13_RS23780 () | 108823..109644 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| K9U13_RS23785 () | 109941..110543 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| K9U13_RS23790 () | 110864..111247 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K9U13_RS23795 () | 111434..112123 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| K9U13_RS23800 () | 112216..112617 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| K9U13_RS23805 () | 112650..113015 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| K9U13_RS23810 () | 113030..113341 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K9U13_RS23815 () | 113363..113929 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| K9U13_RS23820 () | 113916..114644 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| K9U13_RS23825 () | 114644..116071 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K9U13_RS23830 () | 116061..116651 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K9U13_RS23835 () | 116638..116835 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| K9U13_RS23840 () | 116847..117098 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| K9U13_RS23845 () | 117095..117610 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K9U13_RS23850 () | 117745..117966 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| K9U13_RS23855 () | 118126..120753 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| K9U13_RS23860 () | 120750..121136 | + | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| K9U13_RS23865 () | 121133..121765 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| K9U13_RS23870 () | 121762..122754 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| K9U13_RS23875 () | 122763..123401 | + | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K9U13_RS23880 () | 123398..125206 | + | 1809 | WP_228589214.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K9U13_RS23885 () | 125233..125490 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| K9U13_RS23890 () | 125483..126226 | + | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K9U13_RS23895 () | 126242..126589 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| K9U13_RS23900 () | 126591..126905 | - | 315 | WP_001324103.1 | hypothetical protein | - |
| K9U13_RS23905 () | 126986..127270 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K9U13_RS23910 () | 127257..127802 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K9U13_RS23915 () | 127732..128073 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| K9U13_RS23920 () | 128060..128440 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| K9U13_RS23925 () | 128440..129813 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| K9U13_RS23930 () | 129810..132632 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K9U13_RS23935 () | 132648..133145 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
| K9U13_RS23940 () | 133177..133908 | + | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| K9U13_RS23945 () | 134161..136314 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| K9U13_RS23950 () | 136323..136721 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K9U13_RS23955 () | 136721..136948 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| K9U13_RS23960 () | 137030..142300 | + | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| K9U13_RS23965 () | 142320..143066 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| K9U13_RS23970 () | 143125..143985 | + | 861 | WP_000704514.1 | putative protein YcjY | VF |
| K9U13_RS23975 () | 144088..144648 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| K9U13_RS23980 () | 144784..144996 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| K9U13_RS23985 () | 145242..145316 | + | 75 | Protein_161 | endonuclease | - |
| - () | 145572..145633 | - | 62 | NuclAT_1 | - | - |
| - () | 145572..145633 | - | 62 | NuclAT_1 | - | - |
| - () | 145572..145633 | - | 62 | NuclAT_1 | - | - |
| - () | 145572..145633 | - | 62 | NuclAT_1 | - | - |
| K9U13_RS23990 () | 145677..145826 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| K9U13_RS23995 () | 146110..146367 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| K9U13_RS24000 () | 146384..146635 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| K9U13_RS24005 () | 146626..146673 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| K9U13_RS24010 () | 146666..147148 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| K9U13_RS24015 () | 147141..147998 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| K9U13_RS24020 () | 148937..149590 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|