NZ_CP0829301..165260

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 165260 bp
Accession: NZ_CP082930        Location: 1..165260         Organism: Salmonella enterica subsp. enterica serovar London isolate N18-04674       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K6991_RS22470 (1) 1..861 + 861 WP_001077807.1 RepB family plasmid replication initiator protein -
K6991_RS22475 (1364) 1364..2044 + 681 Protein_1 DNA methylase -
K6991_RS22480 (2085) 2085..2357 + 273 Protein_2 DUF1380 domain-containing protein -
K6991_RS22485 (2356) 2356..2763 + 408 Protein_3 plasmid SOS inhibition protein A -
- (2775) 2775..2973 + 199 NuclAT_1 - -
- (2775) 2775..2973 + 199 NuclAT_1 - -
- (2775) 2775..2973 + 199 NuclAT_1 - -
- (2775) 2775..2973 + 199 NuclAT_1 - -
K6991_RS22490 (2980) 2980..3129 + 150 Protein_4 plasmid maintenance protein Mok -
K6991_RS22495 (3080) 3080..3196 + 117 WP_001375150.1 type I toxin-antitoxin system Hok family toxin -
K6991_RS22500 (3566) 3566..6556 - 2991 Protein_6 Tn3 family transposase TnpA_ISXc4 Transposase
K6991_RS22505 (6586) 6586..7209 - 624 WP_000684988.1 Tn3 family transposase TnpR_TnEc1 Transposase
K6991_RS22510 (7467) 7467..8677 + 1211 Protein_8 MFS transporter -
K6991_RS22515 (8986) 8986..9369 + 384 WP_232621074.1 phosphatase PAP2 family protein -
K6991_RS22520 (9468) 9468..10106 + 639 WP_000935834.1 methyltransferase domain-containing protein -
K6991_RS22525 (10057) 10057..10719 + 663 WP_031607908.1 DedA family protein -
K6991_RS22530 (10975) 10975..11163 + 189 Protein_12 transposase -
K6991_RS22535 (11219) 11219..11800 - 582 WP_001196199.1 Tn3 family transposase TnpR_Tn3 Transposase
K6991_RS22540 (12115) 12115..14994 + 2880 WP_263258472.1 Tn3 family transposase TnpA_ISShfr9 Transposase
K6991_RS22545 (15310) 15310..15572 - 263 Protein_15 ATP-binding protein -
K6991_RS22550 (15596) 15596..15742 + 147 Protein_16 transposase -
K6991_RS22555 (15745) 15745..15879 + 135 Protein_17 DUF1281 domain-containing protein -
K6991_RS22560 (16034) 16034..18013 + 1980 WP_263258473.1 E3 ubiquitin-protein ligase SspH2 VF
K6991_RS22565 (18113) 18113..18745 + 633 Protein_19 IS256 family transposase ISSod4 Transposase
K6991_RS22570 (19382) 19382..19666 + 285 WP_001674495.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
K6991_RS22575 (19666) 19666..19941 + 276 WP_000421254.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
K6991_RS22580 (20048) 20048..20320 + 273 WP_001105070.1 hypothetical protein -
K6991_RS22585 (20531) 20531..20926 - 396 WP_000445934.1 plasmid partitioning/stability family protein -
K6991_RS22590 (20926) 20926..21885 - 960 WP_000921955.1 plasmid segregation protein ParM -
K6991_RS22595 (22327) 22327..23229 + 903 WP_198430388.1 DUF1281 domain-containing protein -
K6991_RS22600 (23226) 23226..23537 + 312 WP_198430387.1 hypothetical protein -
K6991_RS22605 (23614) 23614..24297 + 684 WP_000086176.1 DNA methylase -
K6991_RS22610 (24298) 24298..24519 + 222 WP_001104897.1 hypothetical protein -
K6991_RS22615 (24515) 24515..24965 + 451 Protein_29 DUF1380 domain-containing protein -
K6991_RS22620 (25010) 25010..25672 + 663 Protein_30 hypothetical protein -
K6991_RS22625 (25679) 25679..25909 + 231 Protein_31 hypothetical protein -
K6991_RS22630 (25956) 25956..26519 + 564 Protein_32 class I SAM-dependent methyltransferase -
K6991_RS22635 (26608) 26608..27076 - 469 Protein_33 hypothetical protein -
K6991_RS22640 (27336) 27336..27839 + 504 WP_000290831.1 single-stranded DNA-binding protein -
K6991_RS22645 (27896) 27896..28140 + 245 Protein_35 DUF905 domain-containing protein -
K6991_RS22650 (28206) 28206..30161 + 1956 WP_000117190.1 ParB/RepB/Spo0J family partition protein -
K6991_RS22655 (30230) 30230..30664 + 435 WP_000845939.1 conjugation system SOS inhibitor PsiB -
K6991_RS22660 (30661) 30661..31380 + 720 WP_263258476.1 plasmid SOS inhibition protein A -
- (31392) 31392..31589 + 198 NuclAT_0 - -
- (31392) 31392..31589 + 198 NuclAT_0 - -
- (31392) 31392..31589 + 198 NuclAT_0 - -
- (31392) 31392..31589 + 198 NuclAT_0 - -
K6991_RS22665 (31597) 31597..31746 + 150 Protein_39 FlmC family protein -
K6991_RS22670 (31694) 31694..31813 + 120 WP_224717299.1 type I toxin-antitoxin system Hok family toxin -
K6991_RS22675 (32114) 32114..32396 - 283 Protein_41 hypothetical protein -
K6991_RS22680 (32466) 32466..32672 + 207 WP_000275846.1 hypothetical protein -
K6991_RS22685 (32697) 32697..32985 + 289 Protein_43 hypothetical protein -
K6991_RS22690 (33104) 33104..33925 + 822 WP_001234469.1 DUF932 domain-containing protein -
K6991_RS22695 (34104) 34104..34751 - 648 WP_000470456.1 hypothetical protein VF
K6991_RS22700 (35037) 35037..35417 + 381 WP_001151568.1 conjugal transfer relaxosome DNA-binding protein TraM -
K6991_RS22705 (35612) 35612..36301 + 690 WP_001674567.1 conjugal transfer transcriptional regulator TraJ -
K6991_RS22710 (36394) 36394..36795 + 402 WP_227005938.1 conjugal transfer relaxosome DNA-bindin protein TraY -
K6991_RS22715 (36837) 36837..37199 + 363 WP_001274202.1 type IV conjugative transfer system pilin TraA -
K6991_RS22720 (37214) 37214..37525 + 312 WP_000012128.1 type IV conjugative transfer system protein TraL -
K6991_RS22725 (37547) 37547..38113 + 567 WP_000399762.1 type IV conjugative transfer system protein TraE -
K6991_RS22730 (38100) 38100..38840 + 741 WP_001230720.1 type-F conjugative transfer system secretin TraK -
K6991_RS22735 (38840) 38840..40261 + 1422 WP_000146699.1 F-type conjugal transfer pilus assembly protein TraB -
K6991_RS22740 (40251) 40251..40847 + 597 WP_000527902.1 conjugal transfer pilus-stabilizing protein TraP -
K6991_RS22745 (40825) 40825..41070 + 246 WP_077906593.1 DUF2689 domain-containing protein -
K6991_RS22750 (41067) 41067..41582 + 516 WP_001079994.1 type IV conjugative transfer system lipoprotein TraV -
K6991_RS22755 (41717) 41717..41938 + 222 WP_001278699.1 conjugal transfer protein TraR -
K6991_RS22760 (41931) 41931..42337 + 407 Protein_58 hypothetical protein -
K6991_RS22765 (42334) 42334..42717 + 384 WP_000870327.1 hypothetical protein -
K6991_RS22770 (42733) 42733..45381 + 2649 WP_031608474.1 type IV secretion system protein TraC -
K6991_RS22775 (45356) 45356..45742 + 387 WP_000105165.1 type-F conjugative transfer system protein TrbI -
K6991_RS22780 (45739) 45739..46371 + 633 WP_000871995.1 type-F conjugative transfer system protein TraW -
K6991_RS22785 (46368) 46368..47360 + 993 WP_000833319.1 conjugal transfer pilus assembly protein TraU -
K6991_RS22790 (47379) 47379..47687 + 309 WP_010999945.1 hypothetical protein -
K6991_RS22795 (47672) 47672..48310 + 639 WP_000554823.1 type-F conjugative transfer system pilin assembly protein TrbC -
K6991_RS22800 (48347) 48347..48766 + 420 WP_001229397.1 HNH endonuclease signature motif containing protein -
K6991_RS22805 (48763) 48763..50589 + 1827 WP_000827527.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
K6991_RS22810 (50600) 50600..50815 + 216 WP_000700023.1 conjugal transfer protein TrbE -
K6991_RS22815 (50827) 50827..51576 + 750 WP_001226854.1 type-F conjugative transfer system pilin assembly protein TraF -
K6991_RS22820 (51790) 51790..52083 + 294 WP_001233881.1 type-F conjugative transfer system pilin chaperone TraQ -
K6991_RS22825 (52070) 52070..52618 + 549 WP_000055841.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
K6991_RS22830 (52608) 52608..53990 + 1383 WP_001161720.1 conjugal transfer pilus assembly protein TraH -
K6991_RS22835 (53987) 53987..56809 + 2823 WP_001007085.1 conjugal transfer mating-pair stabilization protein TraG -
K6991_RS22840 (56831) 56831..57313 + 483 WP_000787664.1 hypothetical protein -
K6991_RS22845 (57559) 57559..58290 + 732 WP_044127382.1 conjugal transfer complement resistance protein TraT -
K6991_RS22850 (58667) 58667..60829 + 2163 WP_263258477.1 type IV conjugative transfer system coupling protein TraD -
K6991_RS22855 (60838) 60838..61236 - 399 WP_000911322.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K6991_RS22860 (61236) 61236..61463 - 228 WP_000450263.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
K6991_RS22865 (61545) 61545..66803 + 5259 WP_263258478.1 Multifunctional conjugation protein TraI Relaxase
K6991_RS22870 (66823) 66823..67563 + 741 WP_080234079.1 conjugal transfer pilus acetylase TraX -
K6991_RS22875 (67618) 67618..68181 + 564 WP_000139308.1 fertility inhibition protein FinO -
K6991_RS22880 (68298) 68298..68579 + 282 Protein_82 disulfide bond formation protein DsbA -
K6991_RS22885 (68860) 68860..69425 + 566 Protein_83 Phospholipase D VF
K6991_RS22890 (69537) 69537..69803 + 267 WP_001576653.1 replication regulatory protein RepA -
K6991_RS22895 (70051) 70051..70128 + 78 WP_001541552.1 RepA leader peptide Tap -
K6991_RS22900 (70109) 70109..70990 + 882 WP_077906592.1 incFII family plasmid replication initiator RepA -
K6991_RS22905 (72783) 72783..73694 + 912 WP_263258479.1 MFS transporter -
K6991_RS22910 (73894) 73894..74028 - 135 Protein_88 resolvase -
K6991_RS22915 (74471) 74471..74560 + 90 WP_232621075.1 YfdX family protein -
K6991_RS22920 (74629) 74629..74928 + 300 WP_232621076.1 YfdX family protein -
K6991_RS22925 (75022) 75022..75233 - 212 Protein_91 Tn3 family transposase TnpA_TnEc1 Transposase
K6991_RS22930 (75419) 75419..76218 - 800 Protein_92 transposase zinc-binding domain-containing protein -
K6991_RS22935 (76302) 76302..76559 + 258 WP_001674558.1 hypothetical protein -
K6991_RS22940 (76689) 76689..77031 + 343 Protein_94 IS3 family transposase -
K6991_RS22945 (77656) 77656..78201 + 546 WP_001232133.1 hypothetical protein VF
K6991_RS22950 (78216) 78216..80660 + 2445 WP_001674557.1 Outer membrane usher protein YraJ VF
K6991_RS22955 (80653) 80653..81444 + 792 WP_263258480.1 Chaperone protein FaeE VF
K6991_RS22960 (81479) 81479..81970 + 492 WP_000753468.1 hypothetical protein VF
K6991_RS22965 (82208) 82208..83062 + 855 WP_263258481.1 K88 fimbrial protein AB VF
K6991_RS22970 (83237) 83237..84034 + 798 WP_000683894.1 hypothetical protein VF
K6991_RS22975 (84065) 84065..84829 + 765 WP_000758121.1 hypothetical protein VF
K6991_RS22980 (84930) 84930..85629 + 700 Protein_102 hypothetical protein VF
K6991_RS22985 (85816) 85816..86408 - 593 Protein_103 IS3 family transposase IS2 Transposase
K6991_RS22990 (86681) 86681..87649 + 969 WP_263258454.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
K6991_RS22995 (87660) 87660..88673 + 1014 WP_001132097.1 alpha-ketoacid dehydrogenase subunit beta -
K6991_RS23000 (88675) 88675..90201 + 1527 WP_001273876.1 2-oxo acid dehydrogenase subunit E2 -
K6991_RS23005 (90214) 90214..91614 + 1401 WP_000379202.1 dihydrolipoyl dehydrogenase -
K6991_RS23010 (91717) 91717..92139 + 423 WP_001674552.1 DRTGG domain-containing protein -
K6991_RS23015 (92232) 92232..93161 + 930 WP_024135830.1 lipoyl synthase -
K6991_RS23020 (93210) 93210..94361 + 1152 WP_263258455.1 Alcohol dehydrogenase 2 VF
K6991_RS23025 (94455) 94455..95442 + 988 Protein_111 IS256 family transposase ISSod4 Transposase
K6991_RS23030 (95501) 95501..95761 - 261 WP_198430390.1 hypothetical protein -
K6991_RS23035 (95883) 95883..96362 - 480 WP_263258456.1 hypothetical protein -
K6991_RS23040 (96869) 96869..97036 - 168 Protein_114 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family -
K6991_RS23045 (97099) 97099..97287 + 189 Protein_115 IS3 family transposase IS1230B Transposase
K6991_RS23050 (97392) 97392..98559 + 1168 Protein_116 IS21 family transposase -
K6991_RS23055 (98559) 98559..99356 + 798 Protein_117 IS21 family transposase IS21 Transposase
K6991_RS23060 (99414) 99414..100215 + 802 Protein_118 IS3 family transposase -
K6991_RS23065 (100250) 100250..100712 + 463 Protein_119 IS3 family transposase ISEc31 Transposase
K6991_RS23070 (100957) 100957..101190 - 234 WP_000277013.1 hypothetical protein -
K6991_RS23075 (101641) 101641..101904 + 264 WP_024135847.1 transposase -
K6991_RS23080 (102079) 102079..102612 + 534 WP_071530017.1 hypothetical protein VF
K6991_RS23085 (102653) 102653..103309 + 657 WP_263258457.1 hypothetical protein -
K6991_RS23090 (103533) 103533..103735 + 203 Protein_124 Tn3 family transposase TnpA_TnEc1 Transposase
K6991_RS23095 (103898) 103898..105064 + 1167 WP_000523814.1 plasmid-partitioning protein SopA -
K6991_RS23100 (105064) 105064..106035 + 972 WP_000817040.1 ParB/RepB/Spo0J family plasmid partition protein -
K6991_RS23105 (106324) 106324..107328 + 1005 Protein_127 ISL3 family transposase -
K6991_RS23110 (107318) 107318..107586 - 269 Protein_128 SOS response-associated peptidase family protein -
K6991_RS23115 (107926) 107926..108603 + 678 Protein_129 DNA methylase -
K6991_RS23120 (108603) 108603..108824 + 222 WP_001104910.1 hypothetical protein -
K6991_RS23125 (108835) 108835..109160 + 326 Protein_131 DUF1380 domain-containing protein -
K6991_RS23130 (109285) 109285..110249 + 965 Protein_132 IS3 family transposase -
K6991_RS23135 (110259) 110259..110396 + 138 Protein_133 transposase -
K6991_RS23140 (110818) 110818..111834 - 1017 WP_001028170.1 IS110 family transposase ISSaen1 Transposase
K6991_RS23145 (111901) 111901..112875 + 975 Protein_135 IS3 family transposase -
K6991_RS23150 (112918) 112918..113503 - 586 Protein_136 IS630 family transposase -
K6991_RS23155 (113490) 113490..114594 - 1105 Protein_137 IS3 family transposase IS1351 Transposase
K6991_RS23160 (115060) 115060..115323 + 264 WP_001674673.1 hypothetical protein VF
K6991_RS23165 (115372) 115372..116496 + 1125 WP_000621468.1 HrpJ domain-containing protein -
K6991_RS23170 (116508) 116508..118574 + 2067 WP_024135852.1 Invasion protein InvA VF
K6991_RS23175 (118577) 118577..118987 + 411 WP_001250551.1 hypothetical protein -
K6991_RS23180 (119011) 119011..120312 + 1302 WP_000613060.1 putative ATP synthase SpaL VF
K6991_RS23185 (120296) 120296..120772 + 477 WP_000838369.1 hypothetical protein -
K6991_RS23190 (120738) 120738..122018 + 1281 WP_263258458.1 hypothetical protein -
K6991_RS23195 (122018) 122018..122914 + 897 WP_263258459.1 Surface presentation of antigens protein SpaO VF
K6991_RS23200 (122904) 122904..123584 + 681 WP_000950425.1 Surface presentation of antigens protein SpaP VF
K6991_RS23205 (123581) 123581..123835 + 255 WP_263258460.1 hypothetical protein VF
K6991_RS23210 (123848) 123848..124612 + 765 WP_263258461.1 Surface presentation of antigens protein SpaR VF
K6991_RS23215 (124619) 124619..125680 + 1062 WP_263258462.1 Surface presentation of antigens protein SpaS VF
K6991_RS23220 (125708) 125708..126226 + 519 WP_000606361.1 Chaperone protein SicA VF
K6991_RS23225 (126207) 126207..128333 + 2127 WP_000061266.1 Cell invasion protein SipB VF
K6991_RS23230 (128390) 128390..129502 + 1113 WP_000953237.1 hypothetical protein -
K6991_RS23235 (129579) 129579..130805 + 1227 WP_000624988.1 PrgH/EprH family type III secretion apparatus protein -
K6991_RS23240 (130817) 130817..131092 + 276 WP_000633075.1 Protein MxiH VF
K6991_RS23245 (131174) 131174..131485 + 312 WP_263258463.1 hypothetical protein VF
K6991_RS23250 (131488) 131488..132240 + 753 WP_000597256.1 Lipoprotein PrgK VF
K6991_RS23255 (132227) 132227..132799 + 573 WP_000839977.1 hypothetical protein -
K6991_RS23260 (132780) 132780..133463 + 684 WP_001226806.1 hypothetical protein -
K6991_RS23265 (133456) 133456..133803 + 348 WP_001059539.1 hypothetical protein -
K6991_RS23270 (136432) 136432..138111 + 1680 WP_263258464.1 hypothetical protein -
K6991_RS23275 (138108) 138108..139436 + 1329 WP_263258465.1 hypothetical protein -
K6991_RS23280 (139574) 139574..139876 + 303 WP_263258466.1 hypothetical protein -
K6991_RS23285 (139953) 139953..140969 + 1017 WP_263258467.1 IpaD/SipD/SspD family type III secretion system needle tip protein -
K6991_RS23290 (140993) 140993..141451 + 459 WP_263258468.1 hypothetical protein VF
K6991_RS23295 (142032) 142032..143678 + 1647 WP_100214673.1 Protein InvG VF
K6991_RS23300 (146291) 146291..147016 + 726 WP_263258469.1 helix-turn-helix domain-containing protein -
K6991_RS23305 (147162) 147162..147797 + 636 WP_000748277.1 YfdX family protein -
K6991_RS23310 (148277) 148277..148480 - 204 WP_000221620.1 hypothetical protein -
K6991_RS23315 (149167) 149167..150156 + 990 WP_000608197.1 AraC family transcriptional regulator -
K6991_RS23320 (150660) 150660..150899 - 240 Protein_170 hypothetical protein -
K6991_RS23325 (151278) 151278..153158 + 1881 WP_263258470.1 KUP/HAK/KT family potassium transporter -
K6991_RS23330 (153230) 153230..153442 + 213 Protein_172 hypothetical protein -
K6991_RS23335 (153701) 153701..154117 - 417 WP_001674757.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K6991_RS23340 (154114) 154114..154344 - 231 WP_001261285.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
K6991_RS23345 (155089) 155089..155307 + 219 WP_000813642.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
K6991_RS23350 (155309) 155309..155614 + 306 WP_001159865.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
K6991_RS23355 (155616) 155616..155906 + 291 WP_001266174.1 hypothetical protein -
K6991_RS23360 (155903) 155903..156364 + 462 Protein_178 3'-5' exonuclease -
K6991_RS23365 (156593) 156593..157051 + 459 Protein_179 3'-5' exonuclease -
K6991_RS23370 (157086) 157086..157868 + 783 WP_000082173.1 site-specific integrase -
K6991_RS23375 (158019) 158019..158960 - 942 WP_000412547.1 Recombination-promoting nuclease RpnA VF
K6991_RS23380 (159493) 159493..159771 + 279 WP_001209539.1 hypothetical protein -
K6991_RS23385 (159768) 159768..160190 + 423 WP_000691102.1 hypothetical protein -
K6991_RS23390 (160206) 160206..160796 + 591 WP_000611442.1 hypothetical protein -
K6991_RS23395 (160889) 160889..161122 - 234 WP_000178041.1 hypothetical protein -
K6991_RS23400 (161543) 161543..162748 + 1206 WP_000817639.1 Plasmid partition protein A VF
K6991_RS23405 (162745) 162745..163707 + 963 WP_000756322.1 ParB family protein -
K6991_RS23410 (163850) 163850..164332 - 483 Protein_188 DUF4113 domain-containing protein -
K6991_RS23415 (164380) 164380..164802 - 423 WP_263258471.1 translesion error-prone DNA polymerase V autoproteolytic subunit -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance